G160184


Basic Information

Item Value
gene id G160184
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 55185590 ~ 55205725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU182778
ctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttgaccatgttttgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttcttcacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaataaatttgattgattaattgtttttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182778 True 301 lncRNA 0.43 2 55185590 55205725

Neighbor

gene id symbol gene type direction distance location
LOC118940499 NA coding upstream 161405 55000439 ~ 55024185 (+)
LOC110491832 LOC106560753 coding upstream 209441 54951901 ~ 54976149 (+)
spg11 spg11 coding upstream 240810 54852812 ~ 54944780 (+)
calml4b calml4 coding upstream 680994 54491725 ~ 54504596 (+)
cln6b cln6 coding upstream 698681 54474023 ~ 54486909 (+)
znf609a LOC106560750 coding downstream 35675 55241400 ~ 55426308 (+)
LOC110491849 LOC106560749 coding downstream 272822 55478547 ~ 55535685 (+)
myo9ab LOC106560748 coding downstream 386936 55592661 ~ 55819518 (+)
scamp2 scamp2 coding downstream 635720 55841445 ~ 55857300 (+)
LOC110491898 map1a coding downstream 655697 55861422 ~ 55931584 (+)
G160082 NA non-coding upstream 108175 55010209 ~ 55077415 (+)
G160127 NA non-coding upstream 111487 55073529 ~ 55074103 (+)
G160061 NA non-coding upstream 203106 54978910 ~ 54982484 (+)
G160045 NA non-coding upstream 243909 54941100 ~ 54941681 (+)
G159949 NA non-coding upstream 337622 54768824 ~ 54847968 (+)
G160508 NA non-coding downstream 564642 55770367 ~ 55770752 (+)
G160381 NA non-coding downstream 622035 55827760 ~ 55829632 (+)
G160589 NA non-coding downstream 727402 55933127 ~ 55933810 (+)
G160619 NA non-coding downstream 794658 56000383 ~ 56001041 (+)
G159889 LOC106562215 other upstream 456730 54728296 ~ 54728860 (+)
G159415 NA other upstream 832202 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 1163686 54021608 ~ 54021904 (+)
G156000 LOC106560791 other upstream 3361408 51816510 ~ 51824182 (+)
G155541 NA other upstream 3764468 51420847 ~ 51421122 (+)
G160569 NA other downstream 740418 55946143 ~ 55947245 (+)
G161687 NA other downstream 1039319 56245044 ~ 56252598 (+)
G162130 NA other downstream 1842589 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 2722425 57928150 ~ 57931991 (+)
G163660 LOC106561040 other downstream 3009952 58215677 ~ 58216383 (+)

Expression


Co-expression Network