G160569


Basic Information

Item Value
gene id G160569
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 55946143 ~ 55947245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU183214
atgtggacaccacttcaagatagtggattcggctattttcagccacacccgctgctgacaggtgtataaaatcgagcacacagccatgcaaactcaatagacaaacattggcagtaaaatggccggtactgaagagctcagtgactttcaaccatcataggatgctacctttccaacaagtcagttcgtaaaacttctgccctgctaaagctgccccggtcaactgtaagtgctgttattgtgaagtggagacGTATAGGTGCAACAACGGcccagccgcaaagtggtaggccccACAATCTCACAGAATGGGAACGtggagtgctgaagcgcgtagcgagttccaaactgcctctggaagcaacgtcagcacaagaactgtttgtcgagagcatcatgaaatgggtttcatggccgagcaaccgcacacaagcctaagatcaccatgcccaatgccaagcgtcagatggagtggtgtaaagctcgccaccattggactctggagcagtggaaacgctgcTCCAGACGCTTTACCATCTTGGCAGTCCTACGGacgaatctgtgtttggcggatgccaggagaacgctacctgctcgAATGCAGTGGCAACTGTGAAGttcggtggaggaggaataatggtctggggttgtttttcatggttcgggctagaccctttagttcaagtgaagggaaatcttaacgctatacaatgacattctagacaattctgtgcttccaactttgtggcaacagtctggggaaggccctttcctttttcccgcagaaatagtttgtcgagatcggttgggaagaacttgactggcctgcacagagccctgacctcaaacccatcaaactaatttgggatgaattggaagatTGACTGCACTAATGCACTTGTAgtgtgaatggaagcaagtccctgcagaaatgttccaacatctagtagaaagccttcccagaagagtggcggctgttatagcagaaaagggggggaccaatgccatattaatacccatgattttgaaattagatgttctacgagcaggtgtccacatactttagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183214 True 1067 TUCP 0.44 2 55946143 55947245

Neighbor

gene id symbol gene type direction distance location
LOC110491898 map1a coding upstream 14559 55861422 ~ 55931584 (+)
scamp2 scamp2 coding upstream 88843 55841445 ~ 55857300 (+)
myo9ab LOC106560748 coding upstream 126625 55592661 ~ 55819518 (+)
LOC110491849 LOC106560749 coding upstream 410458 55478547 ~ 55535685 (+)
znf609a LOC106560750 coding upstream 519835 55241400 ~ 55426308 (+)
acanb LOC106561101 coding downstream 85245 56032490 ~ 56056380 (+)
LOC110491996 LOC106561096 coding downstream 199216 56146461 ~ 56170964 (+)
LOC110492043 catsper2 coding downstream 260583 56207828 ~ 56229077 (+)
LOC110492132 LOC106561087 coding downstream 539452 56486697 ~ 56497109 (+)
LOC110492152 LOC106584663 coding downstream 560391 56507636 ~ 56518535 (+)
G160589 NA non-coding upstream 12333 55933127 ~ 55933810 (+)
G160381 NA non-coding upstream 116511 55827760 ~ 55829632 (+)
G160508 NA non-coding upstream 175391 55770367 ~ 55770752 (+)
G160184 NA non-coding upstream 740418 55185590 ~ 55205725 (+)
G160619 NA non-coding downstream 53138 56000383 ~ 56001041 (+)
G160635 NA non-coding downstream 72097 56019342 ~ 56019605 (+)
G161494 NA non-coding downstream 84463 56031708 ~ 56031913 (+)
G161559 NA non-coding downstream 142574 56089819 ~ 56090069 (+)
G161594 NA non-coding downstream 183738 56130983 ~ 56131664 (+)
G159889 LOC106562215 other upstream 1217283 54728296 ~ 54728860 (+)
G159415 NA other upstream 1592755 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 1924239 54021608 ~ 54021904 (+)
G156000 LOC106560791 other upstream 4121961 51816510 ~ 51824182 (+)
G155541 NA other upstream 4525021 51420847 ~ 51421122 (+)
G161687 NA other downstream 297799 56245044 ~ 56252598 (+)
G162130 NA other downstream 1101069 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 1980905 57928150 ~ 57931991 (+)
G163660 LOC106561040 other downstream 2268432 58215677 ~ 58216383 (+)
G166131 lmod2 other downstream 3998463 59945708 ~ 59953165 (+)

Expression


Co-expression Network