Gene
RNA
| Item | Value |
|---|---|
| gene id | G160619 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 56000383 ~ 56001041 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like isoform X11 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU183270 | True | 615 | lncRNA | 0.53 | 2 | 56000383 | 56001041 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491898 | map1a | coding | upstream | 68799 | 55861422 ~ 55931584 (+) |
| scamp2 | scamp2 | coding | upstream | 143083 | 55841445 ~ 55857300 (+) |
| myo9ab | LOC106560748 | coding | upstream | 180865 | 55592661 ~ 55819518 (+) |
| LOC110491849 | LOC106560749 | coding | upstream | 464698 | 55478547 ~ 55535685 (+) |
| znf609a | LOC106560750 | coding | upstream | 574075 | 55241400 ~ 55426308 (+) |
| acanb | LOC106561101 | coding | downstream | 31449 | 56032490 ~ 56056380 (+) |
| LOC110491996 | LOC106561096 | coding | downstream | 145420 | 56146461 ~ 56170964 (+) |
| LOC110492043 | catsper2 | coding | downstream | 206787 | 56207828 ~ 56229077 (+) |
| LOC110492132 | LOC106561087 | coding | downstream | 485656 | 56486697 ~ 56497109 (+) |
| LOC110492152 | LOC106584663 | coding | downstream | 506595 | 56507636 ~ 56518535 (+) |
| G160589 | NA | non-coding | upstream | 66573 | 55933127 ~ 55933810 (+) |
| G160381 | NA | non-coding | upstream | 170751 | 55827760 ~ 55829632 (+) |
| G160508 | NA | non-coding | upstream | 229631 | 55770367 ~ 55770752 (+) |
| G160184 | NA | non-coding | upstream | 794658 | 55185590 ~ 55205725 (+) |
| G160635 | NA | non-coding | downstream | 18301 | 56019342 ~ 56019605 (+) |
| G161494 | NA | non-coding | downstream | 30667 | 56031708 ~ 56031913 (+) |
| G161559 | NA | non-coding | downstream | 88778 | 56089819 ~ 56090069 (+) |
| G161594 | NA | non-coding | downstream | 129942 | 56130983 ~ 56131664 (+) |
| G161662 | NA | non-coding | downstream | 192653 | 56193694 ~ 56194674 (+) |
| G160569 | NA | other | upstream | 53138 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 1271523 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 1646995 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 1978479 | 54021608 ~ 54021904 (+) |
| G156000 | LOC106560791 | other | upstream | 4176201 | 51816510 ~ 51824182 (+) |
| G161687 | NA | other | downstream | 244003 | 56245044 ~ 56252598 (+) |
| G162130 | NA | other | downstream | 1047273 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 1927109 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 2214636 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 3944667 | 59945708 ~ 59953165 (+) |
