Gene
RNA
| Item | Value |
|---|---|
| gene id | G161594 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 56130983 ~ 56131664 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106610604 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU184311 | True | 648 | lncRNA | 0.42 | 2 | 56130983 | 56131664 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| acanb | LOC106561101 | coding | upstream | 74603 | 56032490 ~ 56056380 (+) |
| LOC110491898 | map1a | coding | upstream | 199399 | 55861422 ~ 55931584 (+) |
| scamp2 | scamp2 | coding | upstream | 273683 | 55841445 ~ 55857300 (+) |
| myo9ab | LOC106560748 | coding | upstream | 311465 | 55592661 ~ 55819518 (+) |
| LOC110491849 | LOC106560749 | coding | upstream | 595298 | 55478547 ~ 55535685 (+) |
| LOC110491996 | LOC106561096 | coding | downstream | 14797 | 56146461 ~ 56170964 (+) |
| LOC110492043 | catsper2 | coding | downstream | 76164 | 56207828 ~ 56229077 (+) |
| LOC110492132 | LOC106561087 | coding | downstream | 355033 | 56486697 ~ 56497109 (+) |
| LOC110492152 | LOC106584663 | coding | downstream | 375972 | 56507636 ~ 56518535 (+) |
| LOC110492171 | LOC106561080 | coding | downstream | 436910 | 56568574 ~ 56620288 (+) |
| G161559 | NA | non-coding | upstream | 40914 | 56089819 ~ 56090069 (+) |
| G161494 | NA | non-coding | upstream | 99070 | 56031708 ~ 56031913 (+) |
| G160635 | NA | non-coding | upstream | 111378 | 56019342 ~ 56019605 (+) |
| G160619 | NA | non-coding | upstream | 129942 | 56000383 ~ 56001041 (+) |
| G160589 | NA | non-coding | upstream | 197173 | 55933127 ~ 55933810 (+) |
| G161662 | NA | non-coding | downstream | 62030 | 56193694 ~ 56194674 (+) |
| G161663 | i20l1 | non-coding | downstream | 64646 | 56196310 ~ 56197436 (+) |
| G161667 | pdia3 | non-coding | downstream | 68442 | 56200106 ~ 56200510 (+) |
| G161668 | NA | non-coding | downstream | 68858 | 56200522 ~ 56201620 (+) |
| G161715 | NA | non-coding | downstream | 156151 | 56287815 ~ 56288182 (+) |
| G160569 | NA | other | upstream | 183738 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 1402123 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 1777595 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 2109079 | 54021608 ~ 54021904 (+) |
| G156000 | LOC106560791 | other | upstream | 4306801 | 51816510 ~ 51824182 (+) |
| G161687 | NA | other | downstream | 113380 | 56245044 ~ 56252598 (+) |
| G162130 | NA | other | downstream | 916650 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 1796486 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 2084013 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 3814044 | 59945708 ~ 59953165 (+) |
