G161715



Basic Information


Item Value
gene id G161715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 56287815 ~ 56288182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU184453
gttttgctgatgttgaggttgttgtcctggcaccacaatgccagttcacttacctcctccctataggctgactagtcgttgttggttatcaggcctacaaccgtgGTGTCTTCAGCAAGCTTGACGATGGAGTTGGTGCCGTGCAAAGCCACGCAGTCGTATCTGAACAGGAGAGAGCCGAGGacacactgagtcagtgtggaggaggtgttgttgcaaatcctcacagcctgtggtctgcccgtcaggattcagttgcagagggtggtgtctagacccagggctctgagcttggtgacgagcttggagggaacaatagtgttgaatgctgagctgtagtcaatgaacagaattatcatatactgtag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU184453 True 368 lncRNA 0.35 1 56287815 56288182
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110492043 catsper2 coding upstream 58738 56207828 ~ 56229077 (+)
LOC110491996 LOC106561096 coding upstream 116851 56146461 ~ 56170964 (+)
acanb LOC106561101 coding upstream 231435 56032490 ~ 56056380 (+)
LOC110491898 map1a coding upstream 356231 55861422 ~ 55931584 (+)
scamp2 scamp2 coding upstream 430515 55841445 ~ 55857300 (+)
LOC110492132 LOC106561087 coding downstream 198515 56486697 ~ 56497109 (+)
LOC110492152 LOC106584663 coding downstream 219454 56507636 ~ 56518535 (+)
LOC110492171 LOC106561080 coding downstream 280392 56568574 ~ 56620288 (+)
LOC110492185 LOC106561079 coding downstream 333257 56621439 ~ 56633187 (+)
LOC118944174 NA coding downstream 344544 56632726 ~ 56632853 (+)
G161668 NA non-coding upstream 86195 56200522 ~ 56201620 (+)
G161667 pdia3 non-coding upstream 87305 56200106 ~ 56200510 (+)
G161663 i20l1 non-coding upstream 90379 56196310 ~ 56197436 (+)
G161662 NA non-coding upstream 93141 56193694 ~ 56194674 (+)
G161594 NA non-coding upstream 156151 56130983 ~ 56131664 (+)
G161716 NA non-coding downstream 770 56288952 ~ 56289283 (+)
G161722 NA non-coding downstream 8669 56296851 ~ 56297082 (+)
G161724 NA non-coding downstream 10902 56299084 ~ 56299404 (+)
G161821 NA non-coding downstream 12689 56300871 ~ 56301339 (+)
G161857 NA non-coding downstream 44790 56332972 ~ 56333616 (+)
G161687 NA other upstream 35217 56245044 ~ 56252598 (+)
G160569 NA other upstream 340570 55946143 ~ 55947245 (+)
G159889 LOC106562215 other upstream 1558955 54728296 ~ 54728860 (+)
G159415 NA other upstream 1934427 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 2265911 54021608 ~ 54021904 (+)
G162130 NA other downstream 760132 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 1639968 57928150 ~ 57931991 (+)
G163660 LOC106561040 other downstream 1927495 58215677 ~ 58216383 (+)
G166131 lmod2 other downstream 3657526 59945708 ~ 59953165 (+)
G166878 NA other downstream 4227450 60515632 ~ 60515880 (+)

Expression


G161715 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G161715 Expression in each Bioproject

Bar chart with 17 bars.
G161715 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network