Gene
RNA
| Item | Value |
|---|---|
| gene id | G161716 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 56288952 ~ 56289283 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU184454 | True | 332 | lncRNA | 0.32 | 1 | 56288952 | 56289283 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492043 | catsper2 | coding | upstream | 59875 | 56207828 ~ 56229077 (+) |
| LOC110491996 | LOC106561096 | coding | upstream | 117988 | 56146461 ~ 56170964 (+) |
| acanb | LOC106561101 | coding | upstream | 232572 | 56032490 ~ 56056380 (+) |
| LOC110491898 | map1a | coding | upstream | 357368 | 55861422 ~ 55931584 (+) |
| scamp2 | scamp2 | coding | upstream | 431652 | 55841445 ~ 55857300 (+) |
| LOC110492132 | LOC106561087 | coding | downstream | 197414 | 56486697 ~ 56497109 (+) |
| LOC110492152 | LOC106584663 | coding | downstream | 218353 | 56507636 ~ 56518535 (+) |
| LOC110492171 | LOC106561080 | coding | downstream | 279291 | 56568574 ~ 56620288 (+) |
| LOC110492185 | LOC106561079 | coding | downstream | 332156 | 56621439 ~ 56633187 (+) |
| LOC118944174 | NA | coding | downstream | 343443 | 56632726 ~ 56632853 (+) |
| G161715 | NA | non-coding | upstream | 770 | 56287815 ~ 56288182 (+) |
| G161668 | NA | non-coding | upstream | 87332 | 56200522 ~ 56201620 (+) |
| G161667 | pdia3 | non-coding | upstream | 88442 | 56200106 ~ 56200510 (+) |
| G161663 | i20l1 | non-coding | upstream | 91516 | 56196310 ~ 56197436 (+) |
| G161662 | NA | non-coding | upstream | 94278 | 56193694 ~ 56194674 (+) |
| G161722 | NA | non-coding | downstream | 7568 | 56296851 ~ 56297082 (+) |
| G161724 | NA | non-coding | downstream | 9801 | 56299084 ~ 56299404 (+) |
| G161821 | NA | non-coding | downstream | 11588 | 56300871 ~ 56301339 (+) |
| G161857 | NA | non-coding | downstream | 43689 | 56332972 ~ 56333616 (+) |
| G161858 | NA | non-coding | downstream | 45205 | 56334488 ~ 56334912 (+) |
| G161687 | NA | other | upstream | 36354 | 56245044 ~ 56252598 (+) |
| G160569 | NA | other | upstream | 341707 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 1560092 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 1935564 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 2267048 | 54021608 ~ 54021904 (+) |
| G162130 | NA | other | downstream | 759031 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 1638867 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 1926394 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 3656425 | 59945708 ~ 59953165 (+) |
| G166878 | NA | other | downstream | 4226349 | 60515632 ~ 60515880 (+) |
