G161821


Basic Information

Item Value
gene id G161821
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 56300871 ~ 56301339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU184570
ggatttgggagaaggagaaatggggaaggcttgggcgagttgctgtgaggggtgcagtgctgttgaccggggtaggagtagccaggtggaaagcatggccagccgtagaaaaatgcttattgaaattctcaattatagtggatttatcagtggtgacagtgtttcctatcttcagtgcagtgggcagctgggaggaggtgttcttattctccatggactttacagtgtcccagaacttttttgagttagtgttgcaggaagcaaatttctgcttgaaaaagctagccttggcttttctaactgcctgtgtataatggtttctagcttccctgaacagctgcatatcacgggggctgtttgatgctaatgcagaacgccataggatgtttttgtgttggttaagggcagtcaggtctggggagaaccaagggctatatctgttcctggttctatatttcttgaatggggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184570 True 469 lncRNA 0.47 1 56300871 56301339

Neighbor

gene id symbol gene type direction distance location
LOC110492043 catsper2 coding upstream 71794 56207828 ~ 56229077 (+)
LOC110491996 LOC106561096 coding upstream 129907 56146461 ~ 56170964 (+)
acanb LOC106561101 coding upstream 244491 56032490 ~ 56056380 (+)
LOC110491898 map1a coding upstream 369287 55861422 ~ 55931584 (+)
scamp2 scamp2 coding upstream 443571 55841445 ~ 55857300 (+)
LOC110492132 LOC106561087 coding downstream 185358 56486697 ~ 56497109 (+)
LOC110492152 LOC106584663 coding downstream 206297 56507636 ~ 56518535 (+)
LOC110492171 LOC106561080 coding downstream 267235 56568574 ~ 56620288 (+)
LOC110492185 LOC106561079 coding downstream 320100 56621439 ~ 56633187 (+)
LOC118944174 NA coding downstream 331387 56632726 ~ 56632853 (+)
G161724 NA non-coding upstream 1467 56299084 ~ 56299404 (+)
G161722 NA non-coding upstream 3789 56296851 ~ 56297082 (+)
G161716 NA non-coding upstream 11588 56288952 ~ 56289283 (+)
G161715 NA non-coding upstream 12689 56287815 ~ 56288182 (+)
G161668 NA non-coding upstream 99251 56200522 ~ 56201620 (+)
G161857 NA non-coding downstream 31633 56332972 ~ 56333616 (+)
G161858 NA non-coding downstream 33149 56334488 ~ 56334912 (+)
G161862 NA non-coding downstream 34290 56335629 ~ 56335917 (+)
G161866 NA non-coding downstream 35080 56336419 ~ 56336621 (+)
G161886 NA non-coding downstream 60268 56361607 ~ 56362081 (+)
G161687 NA other upstream 48273 56245044 ~ 56252598 (+)
G160569 NA other upstream 353626 55946143 ~ 55947245 (+)
G159889 LOC106562215 other upstream 1572011 54728296 ~ 54728860 (+)
G159415 NA other upstream 1947483 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 2278967 54021608 ~ 54021904 (+)
G162130 NA other downstream 746975 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 1626811 57928150 ~ 57931991 (+)
G163660 LOC106561040 other downstream 1914338 58215677 ~ 58216383 (+)
G166131 lmod2 other downstream 3644369 59945708 ~ 59953165 (+)
G166878 NA other downstream 4214293 60515632 ~ 60515880 (+)

Expression


Co-expression Network