G161823



Basic Information


Item Value
gene id G161823
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 56301355 ~ 56302095 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU184572
ctttagcacactctgccaacccggatgttctagctgtgtctgaatcctggcttaggaagaccaccaaaaattctgaaattttcatcccaaactataacattttcagacaagatagcactgccaaagggggcggtgttgcattctactgcaaagatagcctgcagagttctgtcctactatccaggtctgtacccaaacaatttgaacttctacttttaaaactCAACCtgtctaaaaacaagtctctcaccgttgccgcctgctatagaccaccctctgcccccagctgtgctctggacaccaaaTGTGAACTGAtttcccccccatctatcttcagagcttgtgctgctaggcgacctaaactggaacatgcttaacaccccagccatcctacaatctaagcttgatgccctcaatctcacacaaatgatcaatgaacctaccaggtacctccccaaagccttaaacacgggcaccctcataaatatcatcctaaccaacttgccctctaaatacacctctgctgtcttcaaccaagatctcagcgatcactgcctcattgcctgcatccgtaatcggtcagcggtcaaacgacctccactcatcactgtcaaacgctccctgaaacacttcagtgagcaggcctttctaatcgacctggccggggtatcctggatggatattgatctcatcccatcagtagaggatgcctggctaTTTTTTTATaaggccttcctaacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU184572 True 741 TUCP 0.47 1 56301355 56302095

Neighbor


gene id symbol gene type direction distance location
LOC110492055 LOC106561094 coding downstream 42923 56240080 ~ 56258432 (-)
pdia3 pdia3 coding downstream 93722 56198885 ~ 56207633 (-)
LOC110492018 i20l1 coding downstream 103834 56193678 ~ 56197521 (-)
LOC110492010 LOC106561097 coding downstream 123790 56171545 ~ 56177565 (-)
LOC110491985 LOC106561098 coding downstream 165005 56091212 ~ 56136350 (-)
LOC110492077 LOC106561093 coding upstream 5078 56307173 ~ 56309253 (-)
alkbh3 alkbh3 coding upstream 39812 56341907 ~ 56362608 (-)
hsd17b12a hsd17b12 coding upstream 72846 56374941 ~ 56401083 (-)
LOC110492101 NA coding upstream 101038 56402425 ~ 56434238 (-)
LOC110492111 api5 coding upstream 152479 56454574 ~ 56469193 (-)
G161818 NA non-coding downstream 5892 56295095 ~ 56295463 (-)
G161816 NA non-coding downstream 8874 56291966 ~ 56292481 (-)
G161810 NA non-coding downstream 21944 56279109 ~ 56279411 (-)
G161806 NA non-coding downstream 27974 56273173 ~ 56273381 (-)
G161600 NA non-coding downstream 210628 56090245 ~ 56090727 (-)
G161841 NA non-coding upstream 11383 56313478 ~ 56313924 (-)
G161847 NA non-coding upstream 16829 56318924 ~ 56319129 (-)
G161859 NA non-coding upstream 30071 56332166 ~ 56332380 (-)
G161863 NA non-coding upstream 32823 56334918 ~ 56335175 (-)
G162411 NA non-coding upstream 88294 56390389 ~ 56390611 (-)
LOC110491905 ppip5k1 other downstream 357790 55935649 ~ 56006747 (-)
G159890 LOC106562215 other downstream 1572495 54728299 ~ 54728860 (-)
ambra1b LOC106560763 other downstream 2033002 54213602 ~ 54268394 (-)
cd59 cd59-2 other downstream 2330016 53969443 ~ 53971367 (-)
G159120 NA other downstream 2443803 53856686 ~ 53857552 (-)
G162657 NA other upstream 525201 56827296 ~ 56830576 (-)
G162745 NA other upstream 812472 57114567 ~ 57117150 (-)
G162897 NA other upstream 938184 57240279 ~ 57241372 (-)
LOC100135818 LOC100135818 other upstream 942286 57244381 ~ 57250155 (-)
c2h11orf16 cssa10h11orf16 other upstream 1030983 57332151 ~ 57340310 (-)

Expression



Co-expression Network