Gene
RNA
| Item | Value |
|---|---|
| gene id | G161866 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 56336419 ~ 56336621 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU184620 | True | 203 | lncRNA | 0.38 | 1 | 56336419 | 56336621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492043 | catsper2 | coding | upstream | 107342 | 56207828 ~ 56229077 (+) |
| LOC110491996 | LOC106561096 | coding | upstream | 165455 | 56146461 ~ 56170964 (+) |
| acanb | LOC106561101 | coding | upstream | 280039 | 56032490 ~ 56056380 (+) |
| LOC110491898 | map1a | coding | upstream | 404835 | 55861422 ~ 55931584 (+) |
| scamp2 | scamp2 | coding | upstream | 479119 | 55841445 ~ 55857300 (+) |
| LOC110492132 | LOC106561087 | coding | downstream | 150076 | 56486697 ~ 56497109 (+) |
| LOC110492152 | LOC106584663 | coding | downstream | 171015 | 56507636 ~ 56518535 (+) |
| LOC110492171 | LOC106561080 | coding | downstream | 231953 | 56568574 ~ 56620288 (+) |
| LOC110492185 | LOC106561079 | coding | downstream | 284818 | 56621439 ~ 56633187 (+) |
| LOC118944174 | NA | coding | downstream | 296105 | 56632726 ~ 56632853 (+) |
| G161862 | NA | non-coding | upstream | 502 | 56335629 ~ 56335917 (+) |
| G161858 | NA | non-coding | upstream | 1507 | 56334488 ~ 56334912 (+) |
| G161857 | NA | non-coding | upstream | 2803 | 56332972 ~ 56333616 (+) |
| G161821 | NA | non-coding | upstream | 35080 | 56300871 ~ 56301339 (+) |
| G161724 | NA | non-coding | upstream | 37015 | 56299084 ~ 56299404 (+) |
| G161886 | NA | non-coding | downstream | 24986 | 56361607 ~ 56362081 (+) |
| G161893 | NA | non-coding | downstream | 44002 | 56380623 ~ 56382309 (+) |
| G161949 | LOC105006114 | non-coding | downstream | 137139 | 56473760 ~ 56474977 (+) |
| G161956 | NA | non-coding | downstream | 167734 | 56504355 ~ 56504559 (+) |
| G161964 | NA | non-coding | downstream | 185113 | 56521734 ~ 56521968 (+) |
| G161687 | NA | other | upstream | 83821 | 56245044 ~ 56252598 (+) |
| G160569 | NA | other | upstream | 389174 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 1607559 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 1983031 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 2314515 | 54021608 ~ 54021904 (+) |
| G162130 | NA | other | downstream | 711693 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 1591529 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 1879056 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 3609087 | 59945708 ~ 59953165 (+) |
| G166878 | NA | other | downstream | 4179011 | 60515632 ~ 60515880 (+) |
