G161956


Basic Information

Item Value
gene id G161956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 56504355 ~ 56504559 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU184740
aagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaattttttcccattcctccttgcaaaacagcttgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccatagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184740 True 205 lncRNA 0.42 1 56504355 56504559

Neighbor

gene id symbol gene type direction distance location
LOC110492132 LOC106561087 coding upstream 7246 56486697 ~ 56497109 (+)
LOC110492043 catsper2 coding upstream 275278 56207828 ~ 56229077 (+)
LOC110491996 LOC106561096 coding upstream 333391 56146461 ~ 56170964 (+)
acanb LOC106561101 coding upstream 447975 56032490 ~ 56056380 (+)
LOC110491898 map1a coding upstream 572771 55861422 ~ 55931584 (+)
LOC110492152 LOC106584663 coding downstream 3077 56507636 ~ 56518535 (+)
LOC110492171 LOC106561080 coding downstream 64015 56568574 ~ 56620288 (+)
LOC110492185 LOC106561079 coding downstream 116880 56621439 ~ 56633187 (+)
LOC118944174 NA coding downstream 128167 56632726 ~ 56632853 (+)
LOC110492175 LOC106561078 coding downstream 128938 56633497 ~ 56637636 (+)
G161949 LOC105006114 non-coding upstream 29378 56473760 ~ 56474977 (+)
G161893 NA non-coding upstream 122046 56380623 ~ 56382309 (+)
G161886 NA non-coding upstream 142274 56361607 ~ 56362081 (+)
G161866 NA non-coding upstream 167734 56336419 ~ 56336621 (+)
G161862 NA non-coding upstream 168438 56335629 ~ 56335917 (+)
G161964 NA non-coding downstream 17175 56521734 ~ 56521968 (+)
G161987 NA non-coding downstream 43438 56547997 ~ 56597839 (+)
G161984 NA non-coding downstream 46139 56550698 ~ 56611209 (+)
G162033 NA non-coding downstream 142803 56647362 ~ 56648579 (+)
G162058 NA non-coding downstream 164322 56668881 ~ 56670364 (+)
G161687 NA other upstream 251757 56245044 ~ 56252598 (+)
G160569 NA other upstream 557110 55946143 ~ 55947245 (+)
G159889 LOC106562215 other upstream 1775495 54728296 ~ 54728860 (+)
G159415 NA other upstream 2150967 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 2482451 54021608 ~ 54021904 (+)
G162130 NA other downstream 543755 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 1423591 57928150 ~ 57931991 (+)
G163660 LOC106561040 other downstream 1711118 58215677 ~ 58216383 (+)
G166131 lmod2 other downstream 3441149 59945708 ~ 59953165 (+)
G166878 NA other downstream 4011073 60515632 ~ 60515880 (+)

Expression


Co-expression Network