G161964


Basic Information

Item Value
gene id G161964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 56521734 ~ 56521968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU184748
aaatgcacctgcactgtgatagtctcggaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaagcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaagcagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU184748 True 235 lncRNA 0.43 1 56521734 56521968

Neighbor

gene id symbol gene type direction distance location
LOC110492152 LOC106584663 coding upstream 3199 56507636 ~ 56518535 (+)
LOC110492132 LOC106561087 coding upstream 24625 56486697 ~ 56497109 (+)
LOC110492043 catsper2 coding upstream 292657 56207828 ~ 56229077 (+)
LOC110491996 LOC106561096 coding upstream 350770 56146461 ~ 56170964 (+)
acanb LOC106561101 coding upstream 465354 56032490 ~ 56056380 (+)
LOC110492171 LOC106561080 coding downstream 46606 56568574 ~ 56620288 (+)
LOC110492185 LOC106561079 coding downstream 99471 56621439 ~ 56633187 (+)
LOC118944174 NA coding downstream 110758 56632726 ~ 56632853 (+)
LOC110492175 LOC106561078 coding downstream 111529 56633497 ~ 56637636 (+)
LOC110492444 LOC106561059 coding downstream 127575 56649543 ~ 56654865 (+)
G161956 NA non-coding upstream 17175 56504355 ~ 56504559 (+)
G161949 LOC105006114 non-coding upstream 46757 56473760 ~ 56474977 (+)
G161893 NA non-coding upstream 139425 56380623 ~ 56382309 (+)
G161886 NA non-coding upstream 159653 56361607 ~ 56362081 (+)
G161866 NA non-coding upstream 185113 56336419 ~ 56336621 (+)
G161987 NA non-coding downstream 26029 56547997 ~ 56597839 (+)
G161984 NA non-coding downstream 28730 56550698 ~ 56611209 (+)
G162033 NA non-coding downstream 125394 56647362 ~ 56648579 (+)
G162058 NA non-coding downstream 146913 56668881 ~ 56670364 (+)
G162059 NA non-coding downstream 147571 56669539 ~ 56669837 (+)
G161687 NA other upstream 269136 56245044 ~ 56252598 (+)
G160569 NA other upstream 574489 55946143 ~ 55947245 (+)
G159889 LOC106562215 other upstream 1792874 54728296 ~ 54728860 (+)
G159415 NA other upstream 2168346 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 2499830 54021608 ~ 54021904 (+)
G162130 NA other downstream 526346 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 1406182 57928150 ~ 57931991 (+)
G163660 LOC106561040 other downstream 1693709 58215677 ~ 58216383 (+)
G166131 lmod2 other downstream 3423740 59945708 ~ 59953165 (+)
G166878 NA other downstream 3993664 60515632 ~ 60515880 (+)

Expression


Co-expression Network