Gene
RNA
| Item | Value |
|---|---|
| gene id | G161987 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 56547997 ~ 56597839 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU184772 | True | 1009 | lncRNA | 0.38 | 2 | 56547997 | 56597839 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492152 | LOC106584663 | coding | upstream | 29462 | 56507636 ~ 56518535 (+) |
| LOC110492132 | LOC106561087 | coding | upstream | 50888 | 56486697 ~ 56497109 (+) |
| LOC110492043 | catsper2 | coding | upstream | 318920 | 56207828 ~ 56229077 (+) |
| LOC110491996 | LOC106561096 | coding | upstream | 377033 | 56146461 ~ 56170964 (+) |
| acanb | LOC106561101 | coding | upstream | 491617 | 56032490 ~ 56056380 (+) |
| LOC110492185 | LOC106561079 | coding | downstream | 23600 | 56621439 ~ 56633187 (+) |
| LOC118944174 | NA | coding | downstream | 34887 | 56632726 ~ 56632853 (+) |
| LOC110492175 | LOC106561078 | coding | downstream | 35658 | 56633497 ~ 56637636 (+) |
| LOC110492444 | LOC106561059 | coding | downstream | 51704 | 56649543 ~ 56654865 (+) |
| LOC110492194 | LOC106561057 | coding | downstream | 81869 | 56679708 ~ 56835186 (+) |
| G161964 | NA | non-coding | upstream | 26029 | 56521734 ~ 56521968 (+) |
| G161956 | NA | non-coding | upstream | 43438 | 56504355 ~ 56504559 (+) |
| G161949 | LOC105006114 | non-coding | upstream | 73020 | 56473760 ~ 56474977 (+) |
| G161893 | NA | non-coding | upstream | 165688 | 56380623 ~ 56382309 (+) |
| G161886 | NA | non-coding | upstream | 185916 | 56361607 ~ 56362081 (+) |
| G162033 | NA | non-coding | downstream | 49523 | 56647362 ~ 56648579 (+) |
| G162058 | NA | non-coding | downstream | 71042 | 56668881 ~ 56670364 (+) |
| G162059 | NA | non-coding | downstream | 71700 | 56669539 ~ 56669837 (+) |
| G162230 | NA | non-coding | downstream | 417181 | 57015020 ~ 57015234 (+) |
| G162231 | NA | non-coding | downstream | 418222 | 57016061 ~ 57016311 (+) |
| G161687 | NA | other | upstream | 295399 | 56245044 ~ 56252598 (+) |
| G160569 | NA | other | upstream | 600752 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 1819137 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 2194609 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 2526093 | 54021608 ~ 54021904 (+) |
| G162130 | NA | other | downstream | 450475 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 1330311 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 1617838 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 3347869 | 59945708 ~ 59953165 (+) |
| G166878 | NA | other | downstream | 3917793 | 60515632 ~ 60515880 (+) |
