Gene
RNA
| Item | Value |
|---|---|
| gene id | G162058 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 56668881 ~ 56670364 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU184857 | True | 234 | lncRNA | 0.35 | 2 | 56668881 | 56670364 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492444 | LOC106561059 | coding | upstream | 14016 | 56649543 ~ 56654865 (+) |
| LOC110492175 | LOC106561078 | coding | upstream | 31245 | 56633497 ~ 56637636 (+) |
| LOC110492185 | LOC106561079 | coding | upstream | 35694 | 56621439 ~ 56633187 (+) |
| LOC118944174 | NA | coding | upstream | 36028 | 56632726 ~ 56632853 (+) |
| LOC110492171 | LOC106561080 | coding | upstream | 48593 | 56568574 ~ 56620288 (+) |
| LOC110492194 | LOC106561057 | coding | downstream | 9344 | 56679708 ~ 56835186 (+) |
| LOC110492317 | LOC106561060 | coding | downstream | 198717 | 56869081 ~ 57027778 (+) |
| LOC110492362 | LOC106561070 | coding | downstream | 619128 | 57289492 ~ 57302882 (+) |
| rpl27a | rpl27a | coding | downstream | 655964 | 57326328 ~ 57329184 (+) |
| LOC118944169 | NA | coding | downstream | 657025 | 57327389 ~ 57327520 (+) |
| G162033 | NA | non-coding | upstream | 20302 | 56647362 ~ 56648579 (+) |
| G161984 | NA | non-coding | upstream | 57672 | 56550698 ~ 56611209 (+) |
| G161987 | NA | non-coding | upstream | 71042 | 56547997 ~ 56597839 (+) |
| G161964 | NA | non-coding | upstream | 146913 | 56521734 ~ 56521968 (+) |
| G161956 | NA | non-coding | upstream | 164322 | 56504355 ~ 56504559 (+) |
| G162230 | NA | non-coding | downstream | 344656 | 57015020 ~ 57015234 (+) |
| G162231 | NA | non-coding | downstream | 345697 | 57016061 ~ 57016311 (+) |
| G162239 | NA | non-coding | downstream | 353891 | 57024255 ~ 57024524 (+) |
| G162240 | NA | non-coding | downstream | 359722 | 57030086 ~ 57032664 (+) |
| G161687 | NA | other | upstream | 416283 | 56245044 ~ 56252598 (+) |
| G160569 | NA | other | upstream | 721636 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 1940021 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 2315493 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 2646977 | 54021608 ~ 54021904 (+) |
| G162130 | NA | other | downstream | 377950 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 1257786 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 1545313 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 3275344 | 59945708 ~ 59953165 (+) |
| G166878 | NA | other | downstream | 3845268 | 60515632 ~ 60515880 (+) |
