G162657


Basic Information

Item Value
gene id G162657
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 56827296 ~ 56830576 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU185501
CGACTGAGATCCAGGTCATAGTCGAGGGGCTCCATGTCCGTCTCCCTCATGGGTGTGGCAATCGTGGGCATGGCCATCACCGAGAGCCACTCATCTGATTGgatcctctccctttccttcagCTCGCTACGCCCCTCGTCGCTCTGGCCCTCGGCAACCTGTCGCTCTTCCACCTGAGCTTTCTGCACCAGCTGCAAATCAAAGTCCTGCTGCTCTCGCCTCCACTAGGGGGAGACAGACACAACCATTACTTTATCTGACCACTAGGGGGAGACATACACAACCATTACTTTATCTGACCACTAGGGGGAGACAGACACAACCATTACTTTATCTGACCACTAGTGAAGGGGCAAACAACGATTACTTTATCTGACCACGAGGGAGACAGACTTCTACTTCATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGAGGGGACAAACACAACAGTTACTTTATCTGGTTGATTTTCAgaggcaaaaaaaacaaaaacaaaaaaaacgtattatttcacactaagagacaacacaacaccagcACAGATTGGACCACCCTGTGTAGAACCCGGAGAAAATAAACCGTAAAGTAATGGAGCTGATTTCACAGCACAAATCCTAGTCCCATGAGGATGGACAGCTTCTGTGTTGCAGGGACAAATGGAGTCTTGAGGAGTGAGGACCATGCATCCGAAATCTTGTCTTTCTTGGCTTCTGCATTGTCACCACAGGACGTCCCTACGGTGTCTCCATTCCACCACCAGCAACTTCATTGCATTTAATTGTTTTCAGGATCACCAGAAAGAGGATTTCATTATTAGATTAATGACAGCAACATAAAGAAGCAACCACCAAAAGGATACTGATTAACCTGTTACCACACACACATTTGCTTTTCCAAAAACATACATAAACACATTTGTGTTGTGAGTAAATATCTGTTTGTACTGTATGCGTGTTGTTATGTGTGTGTCCTAGCCCTCAAACCCATGCATGCATCATTGCCACTCCTGTGCGTGTAGGCCTCCCATGATGTGAGGAGAAAGTGCATCACATGCGTTATTgtgctaacccccccccccccccccccccaacagggaAAATACATGCATTACATATTCATCAAACCCCCGCAAAAATggaaacacacagccagaggtGATTTATTTAGTTTTTTGAAGCAAAATGATTTTATTCTCGAGCGCAAATCTCTACATTGGAAAATAACAGGCGTGAAGGAGCTGTGCGTTGCCTCTCAGTATAATTTAGCATTCGCTAGTGTCTCTAGTGACTTCCTTTCTCTGTGCAATTTTCTGTACATCCTCGctgctaaaaaaaataaatcaaGCAATTTGGACGGGGAAAAGCAACATGGTGGAATTTACACCTGCCTTGACGGTAAGCTGGCGGCAGccattttaccccccccccccccctcctgtcctTTCATTTGCAGTGAAGCAGATCAAATAGGCTTAATACTCTCTCACTATGACCTTGACTGTAGAAGTAGGCCGTTGTAGCGATCAACCACGGTTAAGTACAAAAGTCTTTGTGATAAAAGGCTGTGATAATGTCGATGTAGCAGAAACTAAAAACTAAATGCTGTGAATAAGCGACTGTTTAGTGTGTCAATGGTGGGGAAAAAAACGATTCAaatgccccccccaaaaaaagagggAGCCTAAAATCTCTTGGCTATTACGGTGAAGCGTTACAAAATGTAATTTAGTAACCAGCAGGAGTTGACCTACGTGTTGCCAAATGTTAGTAGGAGCTTTGGGAACACAAGGGTTGATGGCAAATGTAGCAAGGAGTTTGAGGGTATTGATGATCTCACAGCAATCTGGTTAAGATTGTGTGTTAGATAATATATTAGATGGTTAAATTAGTCTTCGTAAGGTTGACTCTCCTACGTTGGCACGCACAACAAACCTCAAACAGACATAAGACAACTATCTGAAAGCTCATTTGAATGGGATTCGGTGGTAGCCATAGCACGCCATAGCACGCCATAAGACAAACAGGGTGGAAAAAGGTGAGGCTGAAGGAGAATCTGGTGAGAAGAGGAATGATTATTCACCGGGAACTAAAGGCACTTTGATTTCATTCGATTCATTCCATttgaaagatggagggaggagggcggTTTGATAATGATTTGTGCCACTTCCCACCGAGTTGATTGGTTCAAATAACGATACACATTTCCCCATCCCTCATTTTATCAAATCTctataaaatataattttacaAATGTATAGGCTACTGAAAATATCCTTCAGTAAATAAATACTAATGTACATAAGTGTAAATGTACATAGAATGGGCTTTTCTTTTCTCGTGACAGAGGGGGAAGGCAGAGCTATGCCTGTAGCCaatccccctcttcttctccttgaaatacattcagtgtgtgtcagtgaggTACCGCACGGGGGCACCAGTGATCGGGGAAACGCAACCCATACACCTTCATATGGGGAACAGCTCTGTCTTTACAGTCCCCATCTTCGACAGATATCCCCTCCCCTACTCTCCCAAGCTGCCTCCACCACGCACAGTCCAACCGCTCTATAAGCCCAGCCAGCCACGGCTTTGTCCCATCCAGTCCCACCGGCCCTTCGCGTGCTAGCACGGTGCTAACGCTTACTCATGTTAGTGCCATTGGTTACACATGGGGGAGAGGGTGAGTAGGGGATGTTAGCATGTTAGCAATTGCGGCGGCGCCTATGTGGGGGGTTCGGCGGGGGGGCGGCAGTGGCAGTGGTCCCTGCTTCTGCTGCGGGGGTAACGTACTGAGCCCaggtcagtggaggagagagccctggtggaggaggaggtacgaTGAGCAGTGTTGGAGTGGCGTTCTCCCTGGCTGAGGTTCCTCTTGCGCTCGCGCACCAGggccctctggtgcctcttcatgCGCTCCAGCTGCTCCTCTGCACTCATGCGGCCCCGGGGGGCCTGGGCCAGAGGCTGGGGCTGCTGGCCAGAGGAGTACAGCTGCTCCAAAGCACTCTTAGGTCTCT
>TU185502
CGACTGAGATCCAGGTCATAGTCGAGGGGCTCCATGTCCGTCTCCCTCATGGGTGTGGCAATCGTGGGCATGGCCATCACCGAGAGCCACTCATCTGATTGgatcctctccctttccttcagCTCGCTACGCCCCTCGTCGCTCTGGCCCTCGGCAACCTGTCGCTCTTCCACCTGAGCTTTCTGCACCAGCTGCAAATCAAAGTCCTGCTGCTCTCGCCTCCACTAGGGGGAGACAGACACAACCATTACTTTATCTGACCACTAGGGGGAGACATACACAACCATTACTTTATCTGACCACTAGGGGGAGACAGACACAACCATTACTTTATCTGACCACTAGTGAAGGGGCAAACAACGATTACTTTATCTGACCACGAGGGAGACAGACTTCTACTTCATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGAGGGGACAAACACAACAGTTACTTTATCTGACCACTGGGGGGGACAAACACAACAGTTACTTTATCTGACCACTGGAGGGGACAAACACAACAGTTACTTTATCTGGTTGATTTTCAgaggcaaaaaaaacaaaaacaaaaaaaacgtattatttcacactaagagacaacacaacaccagcACAGATTGGACCACCCTGTGTAGAACCCGGAGAAAATAAACCGTAAAGTAATGGAGCTGATTTCACAGCACAAATCCTAGTCCCATGAGGATGGACAGCTTCTGTGTTGCAGGGACAAATGGAGTCTTGAGGAGTGAGGACCATGCATCCGAAATCTTGTCTTTCTTGGCTTCTGCATTGTCACCACAGGACGTCCCTACGGTGTCTCCATTCCACCACCAGCAACTTCATTGCATTTAATTGTTTTCAGGATCACCAGAAAGAGGATTTCATTATTAGATTAATGACAGCAACATAAAGAAGCAACCACCAAAAGGATACTGATTAACCTGTTACCACACACACATTTGCTTTTCCAAAAACATACATAAACACATTTGTGTTGTGAGTAAATATCTGTTTGTACTGTATGCGTGTTGTTATGTGTGTGTCCTAGCCCTCAAACCCATGCATGCATCATTGCCACTCCTGTGCGTGTAGGCCTCCCATGATGTGAGGAGAAAGTGCATCACATGCGTTATTgtgctaacccccccccccccccccccccaacagggaAAATACATGCATTACATATTCATCAAACCCCCGCAAAAATggaaacacacagccagaggtGATTTATTTAGTTTTTTGAAGCAAAATGATTTTATTCTCGAGCGCAAATCTCTACATTGGAAAATAACAGGCGTGAAGGAGCTGTGCGTTGCCTCTCAGTATAATTTAGCATTCGCTAGTGTCTCTAGTGACTTCCTTTCTCTGTGCAATTTTCTGTACATCCTCGctgctaaaaaaaataaatcaaGCAATTTGGACGGGGAAAAGCAACATGGTGGAATTTACACCTGCCTTGACGGTAAGCTGGCGGCAGccattttaccccccccccccccctcctgtcctTTCATTTGCAGTGAAGCAGATCAAATAGGCTTAATACTCTCTCACTATGACCTTGACTGTAGAAGTAGGCCGTTGTAGCGATCAACCACGGTTAAGTACAAAAGTCTTTGTGATAAAAGGCTGTGATAATGTCGATGTAGCAGAAACTAAAAACTAAATGCTGTGAATAAGCGACTGTTTAGTGTGTCAATGGTGGGGAAAAAAACGATTCAaatgccccccccaaaaaaagagggAGCCTAAAATCTCTTGGCTATTACGGTGAAGCGTTACAAAATGTAATTTAGTAACCAGCAGGAGTTGACCTACGTGTTGCCAAATGTTAGTAGGAGCTTTGGGAACACAAGGGTTGATGGCAAATGTAGCAAGGAGTTTGAGGGTATTGATGATCTCACAGCAATCTGGTTAAGATTGTGTGTTAGATAATATATTAGATGGTTAAATTAGTCTTCGTAAGGTTGACTCTCCTACGTTGGCACGCACAACAAACCTCAAACAGACATAAGACAACTATCTGAAAGCTCATTTGAATGGGATTCGGTGGTAGCCATAGCACGCCATAGCACGCCATAAGACAAACAGGGTGGAAAAAGGTGAGGCTGAAGGAGAATCTGGTGAGAAGAGGAATGATTATTCACCGGGAACTAAAGGCACTTTGATTTCATTCGATTCATTCCATttgaaagatggagggaggagggcggTTTGATAATGATTTGTGCCACTTCCCACCGAGTTGATTGGTTCAAATAACGATACACATTTCCCCATCCCTCATTTTATCAAATCTctataaaatataattttacaAATGTATAGGCTACTGAAAATATCCTTCAGTAAATAAATACTAATGTACATAAGTGTAAATGTACATAGAATGGGCTTTTCTTTTCTCGTGACAGAGGGGGAAGGCAGAGCTATGCCTGTAGCCaatccccctcttcttctccttgaaatacattcagtgtgtgtcagtgaggTACCGCACGGGGGCACCAGTGATCGGGGAAACGCAACCCATACACCTTCATATGGGGAACAGCTCTGTCTTTACAGTCCCCATCTTCGACAGATATCCCCTCCCCTACTCTCCCAAGCTGCCTCCACCACGCACAGTCCAACCGCTCTATAAGCCCAGCCAGCCACGGCTTTGTCCCATCCAGTCCCACCGGCCCTTCGCGTGCTAGCACGGTGCTAACGCTTACTCATGTTAGTGCCATTGGTTACACATGGGGGAGAGGGTGAGTAGGGGATGTTAGCATGTTAGCAATTGCGGCGGCGCCTATGTGGGGGGTTCGGCGGGGGGGCGGCAGTGGCAGTGGTCCCTGCTTCTGCTGCGGGGGTAACGTACTGAGCCCaggtcagtggaggagagagccctggtggaggaggaggtacgaTGAGCAGTGTTGGAGTGGCGTTCTCCCTGGCTGAGGTTCCTCTTGCGCTCGCGCACCAGggccctctggtgcctcttcatgCGCTCCAGCTGCTCCTCTGCACTCATGCGGCCCCGGGGGGCCTGGGCCAGAGGCTGGGGCTGCTGGCCAGAGGAGTACAGCTGCTCCAAAGCACTCTTAGGTCTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU185501 False 3166 TUCP 0.48 2 56827296 56830576
TU185502 True 3242 lncRNA 0.47 2 56827296 56830576

Neighbor

gene id symbol gene type direction distance location
LOC110492166 LOC106561081 coding downstream 266509 56547837 ~ 56560787 (-)
LOC110492158 LOC106561083 coding downstream 285762 56527654 ~ 56541534 (-)
c2h12orf73 NA coding downstream 340636 56484556 ~ 56486660 (-)
si:dkey-42p14.3 LOC105006113 coding downstream 342826 56479441 ~ 56484470 (-)
LOC110492118 LOC106561086 coding downstream 344719 56469565 ~ 56482577 (-)
LOC110492408 smap coding upstream 5234 56835810 ~ 56838821 (-)
LOC118941078 NA coding upstream 137572 56968148 ~ 56971786 (-)
LOC118941077 NA coding upstream 203860 57034436 ~ 57039319 (-)
zgc:113516 eki1 coding upstream 217735 57048311 ~ 57118294 (-)
LOC110492288 LOC106561064 coding upstream 322342 57152918 ~ 57235251 (-)
G162662 NA non-coding downstream 10538 56816162 ~ 56816758 (-)
G162647 NA non-coding downstream 30129 56795295 ~ 56797167 (-)
G162565 NA non-coding downstream 163305 56663784 ~ 56663991 (-)
G162560 NA non-coding downstream 170044 56656849 ~ 56657252 (-)
G162781 NA non-coding upstream 157649 56988225 ~ 56989720 (-)
G162797 NA non-coding upstream 182536 57013112 ~ 57013337 (-)
G162798 NA non-coding upstream 183900 57014476 ~ 57015002 (-)
G162801 NA non-coding upstream 192600 57023176 ~ 57023474 (-)
G162791 NA non-coding upstream 196709 57027285 ~ 57027775 (-)
G161823 NA other downstream 525201 56301355 ~ 56302095 (-)
LOC110491905 ppip5k1 other downstream 883731 55935649 ~ 56006747 (-)
G159890 LOC106562215 other downstream 2098436 54728299 ~ 54728860 (-)
ambra1b LOC106560763 other downstream 2558943 54213602 ~ 54268394 (-)
cd59 cd59-2 other downstream 2855957 53969443 ~ 53971367 (-)
G162745 NA other upstream 283991 57114567 ~ 57117150 (-)
G162897 NA other upstream 409703 57240279 ~ 57241372 (-)
LOC100135818 LOC100135818 other upstream 413805 57244381 ~ 57250155 (-)
c2h11orf16 cssa10h11orf16 other upstream 502502 57332151 ~ 57340310 (-)
LOC110492469 NA other upstream 764961 57583975 ~ 57601508 (-)

Expression


Co-expression Network