Gene
RNA
| Item | Value |
|---|---|
| gene id | G162241 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 57033156 ~ 57033721 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU185045 | True | 277 | lncRNA | 0.36 | 2 | 57033156 | 57033721 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492317 | LOC106561060 | coding | upstream | 5378 | 56869081 ~ 57027778 (+) |
| LOC110492194 | LOC106561057 | coding | upstream | 197970 | 56679708 ~ 56835186 (+) |
| LOC110492444 | LOC106561059 | coding | upstream | 378291 | 56649543 ~ 56654865 (+) |
| LOC110492175 | LOC106561078 | coding | upstream | 395520 | 56633497 ~ 56637636 (+) |
| LOC118944174 | NA | coding | upstream | 400303 | 56632726 ~ 56632853 (+) |
| LOC110492362 | LOC106561070 | coding | downstream | 255771 | 57289492 ~ 57302882 (+) |
| rpl27a | rpl27a | coding | downstream | 292607 | 57326328 ~ 57329184 (+) |
| LOC118944169 | NA | coding | downstream | 293668 | 57327389 ~ 57327520 (+) |
| LOC118944168 | NA | coding | downstream | 294599 | 57328320 ~ 57328450 (+) |
| akip1 | bca3 | coding | downstream | 296675 | 57330396 ~ 57331987 (+) |
| G162240 | NA | non-coding | upstream | 492 | 57030086 ~ 57032664 (+) |
| G162239 | NA | non-coding | upstream | 8632 | 57024255 ~ 57024524 (+) |
| G162231 | NA | non-coding | upstream | 16845 | 57016061 ~ 57016311 (+) |
| G162230 | NA | non-coding | upstream | 17922 | 57015020 ~ 57015234 (+) |
| G162242 | NA | non-coding | downstream | 286 | 57034007 ~ 57034367 (+) |
| G162243 | NA | non-coding | downstream | 913 | 57034634 ~ 57035657 (+) |
| G162244 | NA | non-coding | downstream | 1959 | 57035680 ~ 57036444 (+) |
| G162246 | NA | non-coding | downstream | 5889 | 57039610 ~ 57040022 (+) |
| G162247 | NA | non-coding | downstream | 6569 | 57040290 ~ 57041826 (+) |
| G161687 | NA | other | upstream | 780558 | 56245044 ~ 56252598 (+) |
| G160569 | NA | other | upstream | 1085911 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 2304296 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 2679768 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 3011252 | 54021608 ~ 54021904 (+) |
| G162130 | NA | other | downstream | 14593 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 894429 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 1181956 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 2911987 | 59945708 ~ 59953165 (+) |
| G166878 | NA | other | downstream | 3481911 | 60515632 ~ 60515880 (+) |
