G162816


Basic Information

Item Value
gene id G162816
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 57075330 ~ 57077421 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU185669
ATAGCTTACAGTTTTCTCGCCGTTAGTCACCACCTCTCCACAAAATCATttctctgggtgtgcgccagctcacgCTTTTCCTTAGACGTATACATGATATGGCATGACACAGGTCGTGGTATTTGCAATATGATAATGGGCGTATGAGCAAACAATTTTCAAGAATCTTAGAAGTAACCAAGATGATGTTAAACCCAAGTATGTATAGGCAATTGCTAACCTGTAGGCAATTTCATTACAGGAAGGGCGTTATTCATTTTGCAGAGCGTACAGCAGCTTTAACCACAGTTGCACCGCATTCGGACGTCCAATAGATGGAGCTATATTGTGATACATTTTTAAACCTGGATCAGTCGACCCACAGTTAAGTCTCTAAATGAAATTCATAGGACAAAAAAAAGAGCAAATAGAAAGGCAGAAAGGCTCCTCTAAAAGGTTGAACATTGTCTCCAGACATTTGgatacacaggaggttggtggcaccttaattggggagaacgggctcgtggaaATGTagaggtggaatggtatcaaatacatcagacACACGGTTTCCATGTGTCTGATGTCAATCCATTTACACCGTTTCAGGTATTATTATGAGccgccctcccctcagcagcctccactgttttgGATGTCTAGATCAATATTTAAATGCACgtttatacactacatgaccaaaagtatgtgaacacccgctcgtcgaacatctcattccaaagtcatgggcattaatatggagtttgtccccccctttgctgctataacagcctctactcttctcggtaggctttccattagatgttggaacattgctgcggggacttgctaccattcagccacaagagcaataGTGATAGTTACAATTAATTTCAAAGGTGTTGGATGGGgtagaggtcagggctctgtgcaggccagtcaagttcttccacaccgatctcaacaaactatttctgtattgacctcgctttgtgcacaggggctttgtcatactgaaacaggaaatggccttccccaaactgtttccacaaagtaggaagtacagaatcgtctacaatgtcattgtatgctatatcattaagatttcccttcactgtaactaaggagcctatcccaaaccatgaaaaacagcccgagaccattattcctcctccaccaaactttacagttggcactatgcatccgccaaacccagatttgtccatcggactgccagatggtgaaatgtgATTCATCATTCaggagaacacgtttccactgctccagagtccaatgcgagctttacaccactccagccaacgcttggcattgcgcatggtgatgttaggctgttcggccatggaaaaccatttcattAAGTTTCCGACAAACAATTATTTTGCTGACATTGCTACCAGAAGCAGCttgtaactcggtagtgagtgttccaACCGAGGGTCGacgatttttacacactacgagcttcagcactctgcagtcccgttctgtgatgTTGTGTGGCCTATTACTTtgaggctgagccgttgttgctactATAGACATTTTCACTTCACAGCAACAGAACTTACTGGGGCTGCTCTAGCAGGGGCTACTCTATGCCACGTGGAAAGTCACtgagctgaatccactcatttgaaggggtggtCTACATGCTTTTGTATACATAGTGCACATTTCTGTGCCGAACAAATTAGTTTATTTTTCACATCTCTCAATCTATTGGCTCTTACAAGTCAATCGTCCATAAAATATACATTTCAAATTATTGCTTTGAATGTTTGTTTGTAACGTGGTTTTGTGTGTGATTTAAAAGGAGCCACAGAGGGAGAGGTTGAGAACCGGACAACACACAAAAGCATCAGAGAGACTTTTGTACTTGGGGAATGTAAAAGTGCTTGTGAAAGAGTGTCTTCCGAGGAAACGGAGGTAGACGGGGAGCAGGAAGAGGCTGCACCTGCAGAAGAGCCCCCTCAGTCAGCGTCAGACAGTCACCCGCTGGGGtgggaggcagaggagaggaaggagaggagagaacaggagagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185669 True 2047 lncRNA 0.45 2 57075330 57077421

Neighbor

gene id symbol gene type direction distance location
LOC118941077 NA coding downstream 38549 57034436 ~ 57039319 (-)
LOC118941078 NA coding downstream 103544 56968148 ~ 56971786 (-)
LOC110492408 smap coding downstream 236509 56835810 ~ 56838821 (-)
LOC110492166 LOC106561081 coding downstream 514543 56547837 ~ 56560787 (-)
LOC110492158 LOC106561083 coding downstream 533796 56527654 ~ 56541534 (-)
LOC110492288 LOC106561064 coding upstream 75497 57152918 ~ 57235251 (-)
LOC100135818 LOC100135818 coding upstream 167338 57244381 ~ 57250155 (-)
ric3b ric3 coding upstream 225339 57302760 ~ 57310851 (-)
c2h11orf16 cssa10h11orf16 coding upstream 254730 57332151 ~ 57340310 (-)
LOC110492469 NA coding upstream 518529 57583975 ~ 57601508 (-)
G162792 NA non-coding downstream 46514 57027999 ~ 57028816 (-)
G162791 NA non-coding downstream 47555 57027285 ~ 57027775 (-)
G162801 NA non-coding downstream 51856 57023176 ~ 57023474 (-)
G162798 NA non-coding downstream 60328 57014476 ~ 57015002 (-)
G162898 NA non-coding upstream 164338 57241759 ~ 57242011 (-)
G163113 NA non-coding upstream 176726 57254147 ~ 57256689 (-)
G163115 NA non-coding upstream 183252 57260673 ~ 57260883 (-)
G163127 NA non-coding upstream 200739 57278160 ~ 57278395 (-)
G163130 NA non-coding upstream 206039 57283460 ~ 57283742 (-)
G162657 NA other downstream 244754 56827296 ~ 56830576 (-)
G161823 NA other downstream 773235 56301355 ~ 56302095 (-)
LOC110491905 ppip5k1 other downstream 1131765 55935649 ~ 56006747 (-)
G159890 LOC106562215 other downstream 2346470 54728299 ~ 54728860 (-)
ambra1b LOC106560763 other downstream 2806977 54213602 ~ 54268394 (-)
G162745 NA other upstream 37146 57114567 ~ 57117150 (-)
G162897 NA other upstream 162858 57240279 ~ 57241372 (-)

Expression


Co-expression Network