G162897


Basic Information

Item Value
gene id G162897
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 57240279 ~ 57241372 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU185753
gggttgcgtaaccgTGTGGAAGCCGGCTGGCTAGTGATGACTGTAATTCTGCAAGATCTACCAATATGAATTAAgaactatttacatttttgtagtttagcagacgctcttatccagagcgacttacagtattGAGTGCACACTTTGTTTTCtccatactggtcccccgtgggaacaATCACACAACATTACATGGTATCATCAGTATGGTGAAGCACAAATTAAGTAAGCGTGTGGCCTCTATTGTGAGTTACTACCAGAATACCCATAGGTCAGAGCATAAGGCTTGCGTCCCAATTCTCCCCTCTTTTCCAGAAGTGTGCACTTGCTCACTCCCCATCATGGAGTTAAAAACATAGGATTTGTTATAAGCATTGAATGAGGGGACACTCTAAAGTCCATggggaataagagcacctcctcccagctgcccactgcactgaggctaggtaacactgtcaccaccgataaatccacgataatcgagaatttcaataagcatttctctacggctggccatgctttcctcctggctaccccaaccccggccaacagctccgcaccccccgcagctacttgcccaagcctccccagcttctccttcacccaaatccagatagcagatgttctgaaagagctgcaaaccctggacccatacaaatcagctgggctaaacaatctggaccctctctttctaaaactatccgccgccattgttgcaacccctattaccagtctgttcaacctctcttttgtatcgtcagagatccctaaagattggaaagctgccgcattcatcctcctcttcaaagggggtgacactctagacccaaactgttatagacctatatccatcctgccctgcctttctaaagtcttcgaaagccaagttaataaacagatcactgaccatttcgaatcccaccgtaccttctccgctgtgcaatccggtttccgagctggtcacgggtgcacctcagccacgctcaaggtactaaccgatatcataaccgccatcgataaaagacagtactgtgcagccgtcttcatagacctggccagggctttcaactctgtcaattaCTGTATTCTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185753 True 1094 TUCP 0.48 1 57240279 57241372

Neighbor

gene id symbol gene type direction distance location
LOC110492288 LOC106561064 coding downstream 5028 57152918 ~ 57235251 (-)
zgc:113516 eki1 coding downstream 121985 57048311 ~ 57118294 (-)
LOC118941077 NA coding downstream 203498 57034436 ~ 57039319 (-)
LOC118941078 NA coding downstream 268493 56968148 ~ 56971786 (-)
LOC110492408 smap coding downstream 401458 56835810 ~ 56838821 (-)
LOC100135818 LOC100135818 coding upstream 3387 57244381 ~ 57250155 (-)
ric3b ric3 coding upstream 61388 57302760 ~ 57310851 (-)
c2h11orf16 cssa10h11orf16 coding upstream 90779 57332151 ~ 57340310 (-)
LOC110492469 NA coding upstream 354578 57583975 ~ 57601508 (-)
LOC110492538 LOC106561048 coding upstream 556407 57797779 ~ 57886941 (-)
G162816 NA non-coding downstream 162858 57075330 ~ 57077421 (-)
G162792 NA non-coding downstream 211463 57027999 ~ 57028816 (-)
G162791 NA non-coding downstream 212504 57027285 ~ 57027775 (-)
G162801 NA non-coding downstream 216805 57023176 ~ 57023474 (-)
G162898 NA non-coding upstream 387 57241759 ~ 57242011 (-)
G163113 NA non-coding upstream 12775 57254147 ~ 57256689 (-)
G163115 NA non-coding upstream 19301 57260673 ~ 57260883 (-)
G163127 NA non-coding upstream 36788 57278160 ~ 57278395 (-)
G163130 NA non-coding upstream 42088 57283460 ~ 57283742 (-)
G162745 NA other downstream 123129 57114567 ~ 57117150 (-)
G162657 NA other downstream 409703 56827296 ~ 56830576 (-)
G161823 NA other downstream 938184 56301355 ~ 56302095 (-)
LOC110491905 ppip5k1 other downstream 1296714 55935649 ~ 56006747 (-)
G159890 LOC106562215 other downstream 2511419 54728299 ~ 54728860 (-)
G163839 LOC106561050 other upstream 535097 57776469 ~ 57789383 (-)
G164003 NA other upstream 869969 58111341 ~ 58118221 (-)

Expression


Co-expression Network