Gene
RNA
| Item | Value |
|---|---|
| gene id | G162944 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 57318470 ~ 57318680 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU185807 | True | 211 | lncRNA | 0.42 | 1 | 57318470 | 57318680 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492362 | LOC106561070 | coding | upstream | 15588 | 57289492 ~ 57302882 (+) |
| LOC110492317 | LOC106561060 | coding | upstream | 290692 | 56869081 ~ 57027778 (+) |
| LOC110492194 | LOC106561057 | coding | upstream | 483284 | 56679708 ~ 56835186 (+) |
| LOC110492444 | LOC106561059 | coding | upstream | 663605 | 56649543 ~ 56654865 (+) |
| LOC110492175 | LOC106561078 | coding | upstream | 680834 | 56633497 ~ 56637636 (+) |
| rpl27a | rpl27a | coding | downstream | 7648 | 57326328 ~ 57329184 (+) |
| LOC118944169 | NA | coding | downstream | 8709 | 57327389 ~ 57327520 (+) |
| LOC118944168 | NA | coding | downstream | 9640 | 57328320 ~ 57328450 (+) |
| akip1 | bca3 | coding | downstream | 11716 | 57330396 ~ 57331987 (+) |
| LOC110492278 | wee1 | coding | downstream | 28180 | 57346860 ~ 57368863 (+) |
| G162939 | NA | non-coding | upstream | 7639 | 57310584 ~ 57310831 (+) |
| G162922 | NA | non-coding | upstream | 40455 | 57277803 ~ 57278015 (+) |
| G162270 | NA | non-coding | upstream | 153634 | 57074503 ~ 57164836 (+) |
| G162299 | NA | non-coding | upstream | 193026 | 57125145 ~ 57125444 (+) |
| G162267 | eki1 | non-coding | upstream | 247456 | 57069356 ~ 57071014 (+) |
| G162955 | NA | non-coding | downstream | 27558 | 57346238 ~ 57346489 (+) |
| G163047 | NA | non-coding | downstream | 212270 | 57530950 ~ 57531175 (+) |
| G163048 | NA | non-coding | downstream | 213269 | 57531949 ~ 57532168 (+) |
| G163049 | NA | non-coding | downstream | 215268 | 57533948 ~ 57534243 (+) |
| LOC110492340 | LOC106561069 | non-coding | downstream | 218272 | 57536947 ~ 57546176 (+) |
| G162130 | NA | other | upstream | 264828 | 57048314 ~ 57053642 (+) |
| G161687 | NA | other | upstream | 1065872 | 56245044 ~ 56252598 (+) |
| G160569 | NA | other | upstream | 1371225 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 2589610 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 2965082 | 54352983 ~ 54353388 (+) |
| G163513 | LOC106561046 | other | downstream | 609470 | 57928150 ~ 57931991 (+) |
| G163660 | LOC106561040 | other | downstream | 896997 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 2627028 | 59945708 ~ 59953165 (+) |
| G166878 | NA | other | downstream | 3196952 | 60515632 ~ 60515880 (+) |
| LOC110493059 | LOC100194658 | other | downstream | 3532752 | 60851417 ~ 60866455 (+) |
