G163163


Basic Information

Item Value
gene id G163163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 57446314 ~ 57449277 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU186049
AGGATTTGAGAGGTAGAAATGAAGTTCATTTAAACGGGAGCCAGGGAAAAAGTTAGCATGAAAGGCTTCAAAACAGAAGtacataacatactgtataatcTCATAACAAGAGCATTTTAAAAAAACAGCCAAGTCCTCCTACATTACTTTATCCAGTCCATCAAATGTCAAATGAAAAAAATCATAACGGTTCATCAGAATTATTTTAAGATCAGTATGATAGGAACTTCCCCTGTATACATAGGAGAGTATAACATAGGAGTGTATAGCATGGAGTACTTGAGGGAAGCACATGCACATACTTTTGTGTGAAAGCTCATAAGGttgtgtacagtactgtatttcgACTTGATAAAGTAAATACCATACAGTGCCATGTAAGCATTTGACTGTTTGAGATAATCATCGACTCTGCTGGAGTCATATAGTCCATTACACACAAattaccatttaaaaaaaaaaaaaggtagactcagcgtTATGACGTTGCCACGACCAGCACCGAAGACACTGAGATGAAAGACTTGGCtctcagagacacacagagtaTCTGCCAATAGGCACGGGTGTGCTTCACGCTGCTAAAGTGGTAGCTACGACGgcaccacaacaacagaaaagTTTAGCCCCgcgcttcaacgctcttagttgttgcggaaatGGGCCCAATATTGCTGTTAACGTCGTGCAACACTGAGTTTACCTTTAAATTAGAGTACAGTTAAATTATCATAGCATTCTTACTACCTATTAAAAATAACCATGATGCTAACTTTTGGCTAATGAATCCAGTTCCTATGCCTTTAAAAATGGTCAACTTCACAGCAAATGTCAGACACATTAGTAAAAGTTGACGTGATTGCCTCATGCAGAATCCAAACTGCTGATTATAGTAGTTCTCTACCATCTTGCTGGCATTAATTATTCATATTTCATATGCCTCATTCCCCACCCCAACTCATCGAACTCCTACAAGTGgtaaaaaacactttttttttggtatGCAAAAACAACAGGATTCACCAGCAATATATCCAGCAATATActgttttcattaaaaaaaagtatGATATGGTTATAGTAGTGGTTAACACCAATTCCAGCGCATTGTTTTTCCAGAGGTGCAGCTATCTATGGCCAGGGAAGGACACTTAAACCTAATTTATACCCTACATACAGGATGCAAAATCTCCAATTAGCTACGTAAAACGGCGACCCTACATAGTTCCGTAGCCAAAATACGCAGACGTGTGCAGGTCCAGCAATTTGTAACTCGATACAAGTACAAGATTGTCATTTTGAGTAGCTAATTGAGTTCTTGTATGTATCGTGAGGTATAAATTAGGCTTTactcacgccccccccccccccccaggagtgAGGAAGAGCAGAAAACAACTAGTGTCTTTAAAAGGAAGTCAATAACTAAACAACAGAACAGTCCTCTGAGATACTAGTGGATCCTCCCTTTAGGCGGCAATTTAGGAAATGTTTACTGTGTAGTATGTTGTGTTTCAGTCCGTTTTAGGACGACAGCGCACTTTCATTTGATCTTTCAACAGTTTTCGATGGGTCTCTTGATCTTTTGATTCCTGCTCCATGTCAGCTACGGGGAGACGTGACGTTCAGAAGCACCATTGTCCATGCGGTTGTATAGAACTTGAGTCTTCCTGGTAGCCGGgctcgtgttcattagggcacgcaaTGGAAAATATTTAGCAAAAATAAAACAAGAATGtacgtttcttattggacaagtccgcatagtccctttcctgtttcaatcCGTTTTCTTCCGTTTGATGCCTAAATGAACAGGACCCTGGTGTCAGAGACCGGTTCCAAAGATTGTTCCAGACAGTTTCTTAACGAAGCTGCTCATAATGTGAGAGGTCAGACTGAGAACTCGGCGCCGGCTTTCCTGGAGCTAGTGGTGAGTAGCCGGCGCAGTCGGAGACCGGCAAACGGGTTGATCCACAACAGTGACGGCTGGCCACCAAACACGCTCCTCATGCCCTCCCAGCGAACTTGCCTCTCCCAAGTGGGCTTCTCATTCTTCAGACGCTCAATCTcctagtaacacacacacacacacacagagagaggggtaaacgGGCAACGCACAGTGAGAATTCAATAAAAGATGAGCTAATGGTCAAATAACCACAATGGTAAAAAAGCCTGCCATAAGTCACGAGTCTCAAAATCACCACCACTAAGTTTCTACTTTCTGATGGCTGATGTCTCATTTGTAAATAGGCCCCATTTCCCTCCTGATTCTATTGACAAATGGGACTTCACTACCATGACCATGTGCTTGTTCAGAGGGGCAGGACACTTGGAAACAAATCCCAATCATGCAGAATAGAGAATCTTATTGTTGATAGAAATGGTCAATGTAGAATGGCGTTCTGTAATGCCTTTGCCCTACTGAATAAGCCCTGCATGTCTATCTATGGTTTGTCTATGTGGTTTGGCTCCTCACCGTCTTGTTGCAGATGGAGTGGACCTGAGAATGTAATGTATAACATGGAAACAATTCTTAATCATGCACAAGACTCCATCTAATCTACATTGTATATCTGAGGTTGTGTGTTCAATTCCCACAAGAATCACATAACACAAATTGAAAATGTAGGCAATCACCGTGCAGAAACTTActtaggatttttttttaaagatttaaAAAATGTCTGCTAAGTGGCATATACTGTTAATCTCCTCACTGTCTCATCATTGCAGATGGAGTGGACCTGAGTGCCAAACATGATAGCTGTGAAGCTGAGGAAGAGGAGGCCCTCAAGGCAGAGGAAGATCATCAGCATCACCGTCACCGGAGGGGAAAAGTCACTGCACTCTGGAGGGGCAGAAACATCATCCAGCATAATGACATCAACACTGACCTCAATGTAGTTATATTTGAAGCTGCAATCC
>TU186052
AGGATTTGAGAGGTAGAAATGAAGTTCATTTAAACGGGAGCCAGGGAAAAAGTTAGCATGAAAGGCTTCAAAACAGAAGtacataacatactgtataatcTCATAACAAGAGCATTTTAAAAAAACAGCCAAGTCCTCCTACATTACTTTATCCAGTCCATCAAATGTCAAATGAAAAAAATCATAACGGTTCATCAGAATTATTTTAAGATCAGTATGATAGGAACTTCCCCTGTATACATAGGAGAGTATAACATAGGAGTGTATAGCATGGAGTACTTGAGGGAAGCACATGCACATACTTTTGTGTGAAAGCTCATAAGGttgtgtacagtactgtatttcgACTTGATAAAGTAAATACCATACAGTGCCATGTAAGCATTTGACTGTTTGAGATAATCATCGACTCTGCTGGAGTCATATAGTCCATTACACACAAattaccatttaaaaaaaaaaaaaggtagactcagcgtTATGACGTTGCCACGACCAGCACCGAAGACACTGAGATGAAAGACTTGGCtctcagagacacacagagtaTCTGCCAATAGGCACGGGTGTGCTTCACGCTGCTAAAGTGGTAGCTACGACGgcaccacaacaacagaaaagTTTAGCCCCgcgcttcaacgctcttagttgttgcggaaatGGGCCCAATATTGCTGTTAACGTCGTGCAACACTGAGTTTACCTTTAAATTAGAGTACAGTTAAATTATCATAGCATTCTTACTACCTATTAAAAATAACCATGATGCTAACTTTTGGCTAATGAATCCAGTTCCTATGCCTTTAAAAATGGTCAACTTCACAGCAAATGTCAGACACATTAGTAAAAGTTGACGTGATTGCCTCATGCAGAATCCAAACTGCTGATTATAGTAGTTCTCTACCATCTTGCTGGCATTAATTATTCATATTTCATATGCCTCATTCCCCACCCCAACTCATCGAACTCCTACAAGTGgtaaaaaacactttttttttggtatGCAAAAACAACAGGATTCACCAGCAATATATCCAGCAATATActgttttcattaaaaaaaagtatGATATGGTTATAGTAGTGGTTAACACCAATTCCAGCGCATTGTTTTTCCAGAGGTGCAGCTATCTATGGCCAGGGAAGGACACTTAAACCTAATTTATACCCTACATACAGGATGCAAAATCTCCAATTAGCTACGTAAAACGGCGACCCTACATAGTTCCGTAGCCAAAATACGCAGACGTGTGCAGGTCCAGCAATTTGTAACTCGATACAAGTACAAGATTGTCATTTTGAGTAGCTAATTGAGTTCTTGTATGTATCGTGAGGTATAAATTAGGCTTTactcacgccccccccccccccccaggagtgAGGAAGAGCAGAAAACAACTAGTGTCTTTAAAAGGAAGTCAATAACTAAACAACAGAACAGTCCTCTGAGATACTAGTGGATCCTCCCTTTAGGCGGCAATTTAGGAAATGTTTACTGTGTAGTATGTTGTGTTTCAGTCCGTTTTAGGACGACAGCGCACTTTCATTTGATCTTTCAACAGTTTTCGATGGGTCTCTTGATCTTTTGATTCCTGCTCCATGTCAGCTACGGGGAGACGTGACGTTCAGAAGCACCATTGTCCATGCGGTTGTATAGAACTTGAGTCTTCCTGGTAGCCGGgctcgtgttcattagggcacgcaaTGGAAAATATTTAGCAAAAATAAAACAAGAATGtacgtttcttattggacaagtccgcatagtccctttcctgtttcaatcCGTTTTCTTCCGTTTGATGCCTAAATGAACAGGACCCTGGTGTCAGAGACCGGTTCCAAAGATTGTTCCAGACAGTTTCTTAACGAAGCTGCTCATAATGTGAGAGGTCAGACTGAGAACTCGGCGCCGGCTTTCCTGGAGCTAGTGGTGAGTAGCCGGCGCAGTCGGAGACCGGCAAACGGGTTGATCCACAACAGTGACGGCTGGCCACCAAACACGCTCCTCATGCCCTCCCAGCGAACTTGCCTCTCCCAAGTGGGCTTCTCATTCTTCAGACGCTCAATCTcctagtaacacacacacacacacacacacacacagagagaggggtaaacgGGCAACGCACAGTGAGAATTCAATAAAAGATGAGCTAATGGTCAAATAACCACAATGGTAAAAAAGCCTGCCATAAGTCACGAGTCTCAAAATCACCACCACTAAGTTTCTACTTTCTGATGGCTGATGTCTCATTTGTAAATAGGCCCCATTTCCCTCCTGATTCTATTGACAAATGGGACTTCACTACCATGACCATGTGCTTGTTCAGAGGGGCAGGACACTTGGAAACAAATCCCAATCATGCAGAATAGAGAATCTTATTGTTGATAGAAATGGTCAATGTAGAATGGCGTTCTGTAATGCCTTTGCCCTACTGAATAAGCCCTGCATGTCTATCTATGGTTTGTCTATGTGGTTTGGCTCCTCACCGTCTTGTTGCAGATGGAGTGGACCTGAGAATGTAATGTATAACATGGAAACAATTCTTAATCATGCACAAGACTCCATCTAATCTACATTGTATATCTGAGGTTGTGTGTTCAATTCCCACAAGAATCACATAACACAAATTGAAAATGTAGGCAATCACCGTGCAGAAACTTActtaggatttttttttaaagatttaaAAAATGTCTGCTAAGTGGCATATACTGTTAATCTCCTCACTGTCTCATCATTGCAGATGGAGTGGACCTGAGTGCCAAACATGATAGCTGTGAAGCTGAGGAAGAGGAGGCCCTCAAGGCAGAGGAAGATCATCAGCATCACCGTCACCGGAGGGGAAAAGTCACTGCACTCTGGAGGGGCAGAAACATCATCCAGCATAATGACATCAACACTGACCTCAATGTAGTTATATTTGAAGCTGCAATCC
>TU186050
AGGATTTGAGAGGTAGAAATGAAGTTCATTTAAACGGGAGCCAGGGAAAAAGTTAGCATGAAAGGCTTCAAAACAGAAGtacataacatactgtataatcTCATAACAAGAGCATTTTAAAAAAACAGCCAAGTCCTCCTACATTACTTTATCCAGTCCATCAAATGTCAAATGAAAAAAATCATAACGGTTCATCAGAATTATTTTAAGATCAGTATGATAGGAACTTCCCCTGTATACATAGGAGAGTATAACATAGGAGTGTATAGCATGGAGTACTTGAGGGAAGCACATGCACATACTTTTGTGTGAAAGCTCATAAGGttgtgtacagtactgtatttcgACTTGATAAAGTAAATACCATACAGTGCCATGTAAGCATTTGACTGTTTGAGATAATCATCGACTCTGCTGGAGTCATATAGTCCATTACACACAAattaccatttaaaaaaaaaaaaaggtagactcagcgtTATGACGTTGCCACGACCAGCACCGAAGACACTGAGATGAAAGACTTGGCtctcagagacacacagagtaTCTGCCAATAGGCACGGGTGTGCTTCACGCTGCTAAAGTGGTAGCTACGACGgcaccacaacaacagaaaagTTTAGCCCCgcgcttcaacgctcttagttgttgcggaaatGGGCCCAATATTGCTGTTAACGTCGTGCAACACTGAGTTTACCTTTAAATTAGAGTACAGTTAAATTATCATAGCATTCTTACTACCTATTAAAAATAACCATGATGCTAACTTTTGGCTAATGAATCCAGTTCCTATGCCTTTAAAAATGGTCAACTTCACAGCAAATGTCAGACACATTAGTAAAAGTTGACGTGATTGCCTCATGCAGAATCCAAACTGCTGATTATAGTAGTTCTCTACCATCTTGCTGGCATTAATTATTCATATTTCATATGCCTCATTCCCCACCCCAACTCATCGAACTCCTACAAGTGgtaaaaaacactttttttttggtatGCAAAAACAACAGGATTCACCAGCAATATATCCAGCAATATActgttttcattaaaaaaaagtatGATATGGTTATAGTAGTGGTTAACACCAATTCCAGCGCATTGTTTTTCCAGAGGTGCAGCTATCTATGGCCAGGGAAGGACACTTAAACCTAATTTATACCCTACATACAGGATGCAAAATCTCCAATTAGCTACGTAAAACGGCGACCCTACATAGTTCCGTAGCCAAAATACGCAGACGTGTGCAGGTCCAGCAATTTGTAACTCGATACAAGTACAAGATTGTCATTTTGAGTAGCTAATTGAGTTCTTGTATGTATCGTGAGGTATAAATTAGGCTTTactcacgccccccccccccccccaggagtgAGGAAGAGCAGAAAACAACTAGTGTCTTTAAAAGGAAGTCAATAACTAAACAACAGAACAGTCCTCTGAGATACTAGTGGATCCTCCCTTTAGGCGGCAATTTAGGAAATGTTTACTGTGTAGTATGTTGTGTTTCAGTCCGTTTTAGGACGACAGCGCACTTTCATTTGATCTTTCAACAGTTTTCGATGGGTCTCTTGATCTTTTGATTCCTGCTCCATGTCAGCTACGGGGAGACGTGACGTTCAGAAGCACCATTGTCCATGCGGTTGTATAGAACTTGAGTCTTCCTGGTAGCCGGgctcgtgttcattagggcacgcaaTGGAAAATATTTAGCAAAAATAAAACAAGAATGtacgtttcttattggacaagtccgcatagtccctttcctgtttcaatcCGTTTTCTTCCGTTTGATGCCTAAATGAACAGGACCCTGGTGTCAGAGACCGGTTCCAAAGATTGTTCCAGACAGTTTCTTAACGAAGCTGCTCATAATGTGAGAGGTCAGACTGAGAACTCGGCGCCGGCTTTCCTGGAGCTAGTGGTGAGTAGCCGGCGCAGTCGGAGACCGGCAAACGGGTTGATCCACAACAGTGACGGCTGGCCACCAAACACGCTCCTCATGCCCTCCCAGCGAACTTGCCTCTCCCAAGTGGGCTTCTCATTCTTCAGACGCTCAATCTcctagtaacacacacacacacacacacacacacacagagagaggggtaaacgGGCAACGCACAGTGAGAATTCAATAAAAGATGAGCTAATGGTCAAATAACCACAATGGTAAAAAAGCCTGCCATAAGTCACGAGTCTCAAAATCACCACCACTAAGTTTCTACTTTCTGATGGCTGATGTCTCATTTGTAAATAGGCCCCATTTCCCTCCTGATTCTATTGACAAATGGGACTTCACTACCATGACCATGTGCTTGTTCAGAGGGGCAGGACACTTGGAAACAAATCCCAATCATGCAGAATAGAGAATCTTATTGTTGATAGAAATGGTCAATGTAGAATGGCGTTCTGTAATGCCTTTGCCCTACTGAATAAGCCCTGCATGTCTATCTATGGTTTGTCTATGTGGTTTGGCTCCTCACCGTCTTGTTGCAGATGGAGTGGACCTGAGAATGTAATGTATAACATGGAAACAATTCTTAATCATGCACAAGACTCCATCTAATCTACATTGTATATCTGAGGTTGTGTGTTCAATTCCCACAAGAATCACATAACACAAATTGAAAATGTAGGCAATCACCGTGCAGAAACTTActtaggatttttttttaaagatttaaAAAATGTCTGCTAAGTGGCATATACTGTTAATCTCCTCACTGTCTCATCATTGCAGATGGAGTGGACCTGAGTGCCAAACATGATAGCTGTGAAGCTGAGGAAGAGGAGGCCCTCAAGGCAGAGGAAGATCATCAGCATCACCGTCACCGGAGGGGAAAAGTCAC

Function

NR:

description
palmitoyltransferase ZDHHC7-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186049 False 2934 lncRNA 0.42 2 57446314 57449277
TU186052 False 2942 lncRNA 0.42 2 57446314 57449277
TU186050 True 2861 lncRNA 0.42 2 57446397 57449277

Neighbor

gene id symbol gene type direction distance location
c2h11orf16 cssa10h11orf16 coding downstream 106004 57332151 ~ 57340310 (-)
ric3b ric3 coding downstream 135463 57302760 ~ 57310851 (-)
LOC100135818 LOC100135818 coding downstream 196159 57244381 ~ 57250155 (-)
LOC110492288 LOC106561064 coding downstream 211063 57152918 ~ 57235251 (-)
zgc:113516 eki1 coding downstream 328020 57048311 ~ 57118294 (-)
LOC110492469 NA coding upstream 146673 57583975 ~ 57601508 (-)
LOC110492538 LOC106561048 coding upstream 348502 57797779 ~ 57886941 (-)
dusp8a LOC106561046 coding upstream 478846 57928123 ~ 57994689 (-)
LOC110492572 ptpn5 coding upstream 549028 57998305 ~ 58025998 (-)
LOC110492612 LOC106561041 coding upstream 669710 58118987 ~ 58200644 (-)
G163104 rpl27a non-coding downstream 117129 57327820 ~ 57329185 (-)
G163147 NA non-coding downstream 131157 57314815 ~ 57315157 (-)
G163131 NA non-coding downstream 162276 57283827 ~ 57284038 (-)
G163130 NA non-coding downstream 162572 57283460 ~ 57283742 (-)
G163127 NA non-coding downstream 167919 57278160 ~ 57278395 (-)
G163232 NA non-coding upstream 7316 57456593 ~ 57457164 (-)
G163277 NA non-coding upstream 83004 57532281 ~ 57532697 (-)
G163284 NA non-coding upstream 96592 57545869 ~ 57546149 (-)
G163286 NA non-coding upstream 99922 57549199 ~ 57549419 (-)
G163251 LOC106561074 non-coding upstream 105162 57554439 ~ 57555634 (-)
G162897 NA other downstream 204942 57240279 ~ 57241372 (-)
G162745 NA other downstream 329164 57114567 ~ 57117150 (-)
G162657 NA other downstream 615738 56827296 ~ 56830576 (-)
G163839 LOC106561050 other upstream 327192 57776469 ~ 57789383 (-)
G164003 NA other upstream 662064 58111341 ~ 58118221 (-)
G164037 NA other upstream 724382 58173659 ~ 58175088 (-)

Expression


Co-expression Network