G163473 (LOC106613263)


Basic Information

Item Value
gene id G163473
gene name LOC106613263
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 57855284 ~ 58335346 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU186461
ccagcaggccacaaatgtgcatgtgtctgctcaaacggtcagaaacagactccatgagggtggtatgagggcccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcagtacgtttggcatttgccagagaacaccaagattggcaaattcgccactggcgccctgtgctcttcacagatgaaagcaggttcacactgagcacgtgacagacgtgacagagtctggagacgccgtggagaatgttctgctgcctgcaacatcctccagcatgaccggtttggcggtgggtcagtcatggtgtggggtggcatttcttgggg

Function

NR:

description
olfactory receptor family C subfamily 4 member 10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186461 True 331 lncRNA 0.56 2 57855284 58335346

Neighbor

gene id symbol gene type direction distance location
LOC110492531 LOC106561047 coding upstream 57650 57795263 ~ 57797634 (+)
LOC110492500 LOC106561050 coding upstream 65889 57667227 ~ 57789395 (+)
ush1c LOC106561052 coding upstream 199688 57606860 ~ 57655596 (+)
LOC110492461 LOC106561056 coding upstream 271760 57580154 ~ 57583524 (+)
LOC110492452 ccdc34 coding upstream 275454 57574248 ~ 57579830 (+)
LOC110492721 LOC106561036 coding downstream 462037 58797383 ~ 59033367 (+)
LOC118937284 LOC106609580 coding downstream 1052604 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 1066831 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 1136825 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 1438817 59774163 ~ 59781857 (+)
G163464 NA non-coding upstream 9847 57845123 ~ 57845437 (+)
G163438 NA non-coding upstream 60422 57794549 ~ 57794862 (+)
G163362 NA non-coding upstream 62870 57789707 ~ 57792414 (+)
G163352 NA non-coding upstream 190843 57661952 ~ 57664441 (+)
LOC110492340 LOC106561069 non-coding upstream 318063 57536947 ~ 57546176 (+)
G164289 NA non-coding downstream 160846 58496192 ~ 58497512 (+)
G164304 NA non-coding downstream 168702 58504048 ~ 58504313 (+)
G164307 NA non-coding downstream 170534 58505880 ~ 58506095 (+)
G164312 NA non-coding downstream 173963 58509309 ~ 58509560 (+)
G164317 NA non-coding downstream 178829 58514175 ~ 58514592 (+)
G162130 NA other upstream 801642 57048314 ~ 57053642 (+)
G161687 NA other upstream 1602686 56245044 ~ 56252598 (+)
G160569 NA other upstream 1908039 55946143 ~ 55947245 (+)
G159889 LOC106562215 other upstream 3126424 54728296 ~ 54728860 (+)
G159415 NA other upstream 3501896 54352983 ~ 54353388 (+)
G166131 lmod2 other downstream 1610362 59945708 ~ 59953165 (+)
G166878 NA other downstream 2180286 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 2516086 60851417 ~ 60866455 (+)
G167288 NA other downstream 2727247 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 2896850 61232196 ~ 61232545 (+)

Expression


Co-expression Network