Gene
RNA
| Item | Value |
|---|---|
| gene id | G163499 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 57903837 ~ 57973779 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU186488 | True | 446 | lncRNA | 0.42 | 2 | 57903837 | 57973779 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492531 | LOC106561047 | coding | upstream | 106203 | 57795263 ~ 57797634 (+) |
| LOC110492500 | LOC106561050 | coding | upstream | 114442 | 57667227 ~ 57789395 (+) |
| ush1c | LOC106561052 | coding | upstream | 248241 | 57606860 ~ 57655596 (+) |
| LOC110492461 | LOC106561056 | coding | upstream | 320313 | 57580154 ~ 57583524 (+) |
| LOC110492452 | ccdc34 | coding | upstream | 324007 | 57574248 ~ 57579830 (+) |
| LOC110492579 | LOC106561044 | coding | downstream | 66559 | 58040338 ~ 58109443 (+) |
| LOC110492604 | LOC106561042 | coding | downstream | 136344 | 58110123 ~ 58111180 (+) |
| LOC110492647 | LOC106561039 | coding | downstream | 279825 | 58253604 ~ 58296746 (+) |
| LOC110492681 | LOC106561133 | coding | downstream | 342498 | 58316277 ~ 58322551 (+) |
| LOC110492721 | LOC106561036 | coding | downstream | 823604 | 58797383 ~ 59033367 (+) |
| G163464 | NA | non-coding | upstream | 58400 | 57845123 ~ 57845437 (+) |
| G163438 | NA | non-coding | upstream | 108975 | 57794549 ~ 57794862 (+) |
| G163362 | NA | non-coding | upstream | 111423 | 57789707 ~ 57792414 (+) |
| G163352 | NA | non-coding | upstream | 239396 | 57661952 ~ 57664441 (+) |
| LOC110492340 | LOC106561069 | non-coding | upstream | 366616 | 57536947 ~ 57546176 (+) |
| G163544 | NA | non-coding | downstream | 21525 | 57995304 ~ 57999495 (+) |
| G163591 | NA | non-coding | downstream | 143014 | 58116793 ~ 58176299 (+) |
| G163662 | LOC106561040 | non-coding | downstream | 243212 | 58216991 ~ 58223485 (+) |
| G164289 | NA | non-coding | downstream | 522413 | 58496192 ~ 58497512 (+) |
| G164304 | NA | non-coding | downstream | 530269 | 58504048 ~ 58504313 (+) |
| G162130 | NA | other | upstream | 850195 | 57048314 ~ 57053642 (+) |
| G161687 | NA | other | upstream | 1651239 | 56245044 ~ 56252598 (+) |
| G160569 | NA | other | upstream | 1956592 | 55946143 ~ 55947245 (+) |
| G159889 | LOC106562215 | other | upstream | 3174977 | 54728296 ~ 54728860 (+) |
| G159415 | NA | other | upstream | 3550449 | 54352983 ~ 54353388 (+) |
| G163660 | LOC106561040 | other | downstream | 241898 | 58215677 ~ 58216383 (+) |
| G166131 | lmod2 | other | downstream | 1971929 | 59945708 ~ 59953165 (+) |
| G166878 | NA | other | downstream | 2541853 | 60515632 ~ 60515880 (+) |
| LOC110493059 | LOC100194658 | other | downstream | 2877653 | 60851417 ~ 60866455 (+) |
| G167288 | NA | other | downstream | 3088814 | 61062593 ~ 61074591 (+) |
