G164003


Basic Information

Item Value
gene id G164003
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 58111341 ~ 58118221 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU187105
AGAGCATAGTGTCTAAATGCAAGATAACCTCTACGGTCTACTGCAATGATACTTTCATCCCTCAGATCTCCTTCCGCTATTTCACGTTTTATACAGATGAGTCCGGTCTCTATAAATCTGTTCTCTTTCGAGTACTTGTTTTCCCGATGTATCACACGTGGGGATTCGCTGGAGGTGGATCCCGACGAAGAACCAATCACACAACGTCTGTCGGACACAGGTGTGAGCCCTCCTTCACAAGGCGCAACTCGCTGGCCACCGGTCAATCTGGTGTCTGAAGGATGCCGACGAGACGCCCGGTGTAAGAacgagaagaagaaagagaggggagaggaaatgcGGAGAAGATGGCGGAAACTGAGGTTTTGTTTGAAACTGCTAGTGAGTCGGGAGAAGCTAATAGCACAGAAAGTGAGAATGAGTGGGTGACTGTGGCGAAGAAGATGAGAAGCAAGAGATGTAAAATAGGAAATGCCTAGACTAGTTTTTTGTCCGATTGAGGGTTTTAGGTCACCGCTACTTGGGAAATCCATGTAACGTCTCGAGGAAAATCTGGAATGTGTGAGAGGAACGTGTGGCGTTGGTGAGAGTCACAGGGAGTGGTTGTATTTCGATTTTCTTTGTGTGCCCACGGAACGTGTTTTAAGACTAAAACAGATAGTGGATTTTTGGTAGCAGGGCGCCTACCAAGGGGGTTATTTCTGCGGTGGAgcaagaaagaaataaaagcagagGATATTACCGACGACATCGATGGAGTGGTTGGTGCCCGTCGACTGACCTGTACGGTGGACGGAGAAAAGACATTCACTTCCTCCAGGCTActgttCTTTGATGAGGAGTCTCTCCCTTCTCATATAAAGTTAGGATTAATGAGATACCTTGTTGTGTCATAAATGTAAACGATTTGGTCACGTGTCAGGTGTGTGCAGAAGGGAAGAGTACCGTATGCCAGGTGAAGTGAAATGCGGCAACTGTGGAGGTGAACATGAGCCCCCGGATTCCTGGAATGCCCCGTTAGGGTGAGGGAGAATGAGGTGTCCAGAGTAAGGAGCGTCCAGCGTGTGCCTCAtcatgttcatgtttttttttttcctgaCTCCATTTCTGCCTCTGTTTTTCCCTGCCTCCCTTTGGATAGTGGAGGCTTTTATATTTACTGATAATAGCAAGTGGCTTTACAGCCCACTGAGGGCCCAGAGAGAGGTATTGGCTACCTCTTGGGAACTCTTCACAGACATCTCATTTTGTAGGAGATTTGCAATGCGACATGTCGGGCCGCCCCTCATATGTTTATGAGGTTTTACTGAATGGAATCGCTGCACCTTCGTTAGCGCATTCTATCCTCAGTGTCGGAGCCTCTGCGGGGTAATGCAGTTGGGATTACCCTGGGTTCTGGGAGAGCCTATCTGAGATATGGGAGTTGGCAAAGATTCCCCACATGTGATACGTCAACATCAGTATTTGAAAGAGAACTTAAGGTTACTTTTGTAACCACGGGTTCTCTGATAATGAGTGAGACATATCACCGCATTTCTCTGCTCGCGAGGAATCGAGGCATGCTTGAGATTGACCAGAGGGCGGGGGCGAGTGGCGCCTTATAAGGAGGGAGGGCTCATCTCATTCGCCACTTGACCTGTCTGCCTCCTGTGATTAGTTCTTCATAGTGAACCGCCTTCAGCGAATCCCCATATGTGATACGTCTCACTCATATAATCAGAGAACCGGGGTAACGAAAGTGACCTTTAAGATATTGTTTCACAGACACTGGAATCATTATtgtaaaatgcatttttttgtgtgtgtgaaaagaCACTGGAAATTAGACTTTAGGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106533973

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187105 True 1836 TUCP 0.46 2 58111341 58118221

Neighbor

gene id symbol gene type direction distance location
LOC110492572 ptpn5 coding downstream 85343 57998305 ~ 58025998 (-)
dusp8a LOC106561046 coding downstream 116652 57928123 ~ 57994689 (-)
LOC110492538 LOC106561048 coding downstream 224400 57797779 ~ 57886941 (-)
LOC110492469 NA coding downstream 509833 57583975 ~ 57601508 (-)
c2h11orf16 cssa10h11orf16 coding downstream 771031 57332151 ~ 57340310 (-)
LOC110492612 LOC106561041 coding upstream 766 58118987 ~ 58200644 (-)
LOC110492624 NA coding upstream 68062 58186283 ~ 58194922 (-)
LOC110492633 LOC106561040 coding upstream 90275 58208496 ~ 58248173 (-)
LOC110492691 LOC106561037 coding upstream 239567 58355406 ~ 58389301 (-)
LOC110492741 LOC106561034 coding upstream 1225938 59344159 ~ 59356495 (-)
G163944 NA non-coding downstream 89865 58021094 ~ 58021476 (-)
G163819 NA non-coding downstream 316362 57794615 ~ 57794979 (-)
G163837 LOC106561050 non-coding downstream 346218 57761150 ~ 57765123 (-)
G163825 LOC106561050 non-coding downstream 351012 57738768 ~ 57760329 (-)
G163807 NA non-coding downstream 395028 57716050 ~ 57716313 (-)
G164080 NA non-coding upstream 139799 58258020 ~ 58259366 (-)
G164195 NA non-coding upstream 314584 58432805 ~ 58433005 (-)
G164235 NA non-coding upstream 341056 58459277 ~ 58459589 (-)
G164257 NA non-coding upstream 352107 58470328 ~ 58470584 (-)
G163839 LOC106561050 other downstream 321958 57776469 ~ 57789383 (-)
LOC100135818 LOC100135818 other downstream 861234 57244381 ~ 57250155 (-)
G162897 NA other downstream 869969 57240279 ~ 57241372 (-)
G164037 NA other upstream 55438 58173659 ~ 58175088 (-)
G165742 NA other upstream 1363736 59481957 ~ 59482314 (-)
G165746 NA other upstream 1369240 59487461 ~ 59487840 (-)

Expression


Co-expression Network