Gene
RNA
| Item | Value |
|---|---|
| gene id | G164080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 58258020 ~ 58259366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ATP-citrate synthase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU187187 | True | 1009 | lncRNA | 0.47 | 4 | 58258020 | 58259366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492633 | LOC106561040 | coding | downstream | 9847 | 58208496 ~ 58248173 (-) |
| LOC110492612 | LOC106561041 | coding | downstream | 57376 | 58118987 ~ 58200644 (-) |
| LOC110492624 | NA | coding | downstream | 63098 | 58186283 ~ 58194922 (-) |
| LOC110492572 | ptpn5 | coding | downstream | 232022 | 57998305 ~ 58025998 (-) |
| dusp8a | LOC106561046 | coding | downstream | 263331 | 57928123 ~ 57994689 (-) |
| LOC110492691 | LOC106561037 | coding | upstream | 98422 | 58355406 ~ 58389301 (-) |
| LOC110492741 | LOC106561034 | coding | upstream | 1084793 | 59344159 ~ 59356495 (-) |
| LOC110492772 | LOC106561030 | coding | upstream | 1557359 | 59816725 ~ 59823875 (-) |
| LOC110492782 | LOC106561029 | coding | upstream | 1567258 | 59826624 ~ 59841614 (-) |
| LOC110492793 | LOC106561028 | coding | upstream | 1613551 | 59872917 ~ 59885714 (-) |
| G163944 | NA | non-coding | downstream | 236544 | 58021094 ~ 58021476 (-) |
| G163819 | NA | non-coding | downstream | 463041 | 57794615 ~ 57794979 (-) |
| G163837 | LOC106561050 | non-coding | downstream | 492897 | 57761150 ~ 57765123 (-) |
| G163825 | LOC106561050 | non-coding | downstream | 497691 | 57738768 ~ 57760329 (-) |
| G163807 | NA | non-coding | downstream | 541707 | 57716050 ~ 57716313 (-) |
| G164195 | NA | non-coding | upstream | 173439 | 58432805 ~ 58433005 (-) |
| G164235 | NA | non-coding | upstream | 199911 | 58459277 ~ 58459589 (-) |
| G164257 | NA | non-coding | upstream | 210962 | 58470328 ~ 58470584 (-) |
| G164262 | NA | non-coding | upstream | 216367 | 58475733 ~ 58475946 (-) |
| G164037 | NA | other | downstream | 82932 | 58173659 ~ 58175088 (-) |
| G164003 | NA | other | downstream | 139799 | 58111341 ~ 58118221 (-) |
| G163839 | LOC106561050 | other | downstream | 468637 | 57776469 ~ 57789383 (-) |
| LOC110492469 | NA | other | downstream | 657802 | 57583975 ~ 57601508 (-) |
| G165742 | NA | other | upstream | 1222591 | 59481957 ~ 59482314 (-) |
| G165746 | NA | other | upstream | 1228095 | 59487461 ~ 59487840 (-) |
| G166541 | NA | other | upstream | 1660512 | 59919878 ~ 59920330 (-) |
