G164792


Basic Information

Item Value
gene id G164792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 58912088 ~ 58920664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU187924
tctctgttcagtcttctccttatatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgtgatgtttaaaggttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggaccttcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttactgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187924 True 528 lncRNA 0.39 2 58912088 58920664

Neighbor

gene id symbol gene type direction distance location
LOC110492681 LOC106561133 coding upstream 589537 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 615342 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 800908 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 802645 58040338 ~ 58109443 (+)
LOC110492531 LOC106561047 coding upstream 1114454 57795263 ~ 57797634 (+)
LOC118937284 LOC106609580 coding downstream 467286 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 481513 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 551507 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 853499 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 979466 59900130 ~ 59922883 (+)
G164706 NA non-coding upstream 89230 58794036 ~ 58822858 (+)
G164422 NA non-coding upstream 227266 58636882 ~ 58684822 (+)
G164364 NA non-coding upstream 342880 58568855 ~ 58569208 (+)
G164317 NA non-coding upstream 397496 58514175 ~ 58514592 (+)
G164312 NA non-coding upstream 402528 58509309 ~ 58509560 (+)
G164847 NA non-coding downstream 62911 58983575 ~ 58988570 (+)
G165122 NA non-coding downstream 169535 59090199 ~ 59090524 (+)
G165131 NA non-coding downstream 175693 59096357 ~ 59096581 (+)
G165139 NA non-coding downstream 179818 59100482 ~ 59100758 (+)
G165141 NA non-coding downstream 180216 59100880 ~ 59101358 (+)
G163660 LOC106561040 other upstream 695705 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 980097 57928150 ~ 57931991 (+)
G162130 NA other upstream 1858446 57048314 ~ 57053642 (+)
G161687 NA other upstream 2659490 56245044 ~ 56252598 (+)
G160569 NA other upstream 2964843 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 1025044 59945708 ~ 59953165 (+)
G166878 NA other downstream 1594968 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1930768 60851417 ~ 60866455 (+)
G167288 NA other downstream 2141929 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 2311532 61232196 ~ 61232545 (+)

Expression


Co-expression Network