G164992


Basic Information

Item Value
gene id G164992
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 58929776 ~ 58933587 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188139
TTTTGAGATTTCTCTCaacttaaaataaataattccaaGGTTTAAAAAGACATTCAAATATTTGTTAAGAAATTCTCAGCAATCTAAATCAGAGTGCATTTTTCATCAGCATGAAACAAATCATCATGTTGATACTGATCACACCCCCATTGGCCAGCATGGTAGAAACTAAAATTAATATATCTTGTCGGACAAATCCAGGTAGTGACTCCCGGTTTAAGTAACATATCTTCTTTTTTGTGCcgaatgaacatgacccagtacAAGCATCATGATCCCACTAAGTATAAGGCAACACACCTATGTCTATGTGCCATTGGCACAAACCTGCCATAGTtcctgattattattattacaaattGCAATTTGGTAATGGATATAAATCAAATAGATTAGGATCAGTTTAACTCTCAGGATCAGAGTTCATCCTCTCCATTCACCAGGGCATGCTGAAAATAGTATATATCTCTTTGGTACACAACTTCTTTCCACATGTCAGCATAACAACAATCAAAACAATCAATCCATAATACATTAATTGCTGCACTCAGATAGTTTTTAATATACAAAAAGTATATGTCAGTTTTAAAAATAATTAAGTTTCCAGAACATAATTAAAACCCAATTAATCATCCAACCAAAATGTTGAATGACATTGCTCAGGgattcacattgatTATATCACTCAAAATTAAAACCCTCAACTTAACACACATCAATACTGGTAGAATGTATTACATATATATTAACATACAATATAATTATCCTATAATTCCACTATTAACTTTCTCATCTCAATTATAAttacagatcagtatctcaatgcattcttagcCTAAATTACTATAAATCTAGCAGTGTGTAAAcctccacaatcaacctgataccccaGATAACAATTTTAGACAAGTGTAAATCAAATACAGGCACAGATGACCAACCCCTTCCTTCCCTGGCACTCAATCTTCTGACATCTCTTCATTTCTTCTTCAGATAGCTTCACAGTTCAAAGTGGATGGCCAATtataatgtcccaatttcaatgttTCAGGAATAATTTGATTTTCGCAAACAGACTAACGTCTCACTTGAGCCCCACCACAATGCCTATTATGTCTTGTTCATTTGCCAACCAGTATACCAGCAACATGAGAGAAGTTTTGGAACGGATCTCTCTTCATACTCACTCCACGTGGACTCCTGTTACATTCCTGAGTGAAAAGCATGATAGAAAAGGCAGTTGATAGCTTCAACTGGATGCTGTACACCGGTTGCTGGCTCGGACTCAGTTCTGTAGGTAGAAGTGGTGCAGGACAGGGTCGTATTGAATGTCATTTCTTCAGCCGGTTAGATGGGGTTTTGAGGTCCACAATGTGTGGTCAAATTATCCCTTCCATGAATCTGTAGTCATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188139 True 1415 lncRNA 0.40 2 58929776 58933587

Neighbor

gene id symbol gene type direction distance location
LOC110492691 LOC106561037 coding downstream 540475 58355406 ~ 58389301 (-)
LOC110492633 LOC106561040 coding downstream 681603 58208496 ~ 58248173 (-)
LOC110492612 LOC106561041 coding downstream 729132 58118987 ~ 58200644 (-)
LOC110492624 NA coding downstream 734854 58186283 ~ 58194922 (-)
LOC110492572 ptpn5 coding downstream 903778 57998305 ~ 58025998 (-)
LOC110492741 LOC106561034 coding upstream 410572 59344159 ~ 59356495 (-)
LOC110492772 LOC106561030 coding upstream 883138 59816725 ~ 59823875 (-)
LOC110492782 LOC106561029 coding upstream 893037 59826624 ~ 59841614 (-)
LOC110492793 LOC106561028 coding upstream 939330 59872917 ~ 59885714 (-)
LOC110492804 lmod2 coding upstream 1003334 59936921 ~ 59948593 (-)
G164963 NA non-coding downstream 46177 58878574 ~ 58883599 (-)
G164928 NA non-coding downstream 102919 58826434 ~ 58826857 (-)
G164560 NA non-coding downstream 283322 58575910 ~ 58646454 (-)
G164552 NA non-coding downstream 363396 58565730 ~ 58566380 (-)
G164262 NA non-coding downstream 453830 58475733 ~ 58475946 (-)
G165026 NA non-coding upstream 48429 58982016 ~ 58987113 (-)
G165109 NA non-coding upstream 148208 59081795 ~ 59082139 (-)
G165140 NA non-coding upstream 166954 59100541 ~ 59100836 (-)
G165203 NA non-coding upstream 214610 59148197 ~ 59148495 (-)
G165214 NA non-coding upstream 222057 59155644 ~ 59155870 (-)
G164037 NA other downstream 754688 58173659 ~ 58175088 (-)
G164003 NA other downstream 811555 58111341 ~ 58118221 (-)
G163839 LOC106561050 other downstream 1140393 57776469 ~ 57789383 (-)
G165742 NA other upstream 548370 59481957 ~ 59482314 (-)
G165746 NA other upstream 553874 59487461 ~ 59487840 (-)
G166541 NA other upstream 986291 59919878 ~ 59920330 (-)
G166794 LOC106561021 other upstream 1468761 60402348 ~ 60406808 (-)

Expression


Co-expression Network