G165139


Basic Information

Item Value
gene id G165139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59100482 ~ 59100758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188292
tgaaaaacgaattgtcccgacggatatattatcgaatatatattagaaaaacaccttgaggatggattctaaacaacgtttgccatgtttctgtcgatattatggagctaatttggaatatttttcggcgttgtggtgaccgcaatttccgggcgatttctcagccaaacgtgaagaacaaacggagctatttcgcctacaaaaataatattttgggaaaaaatgaactttggctgtctacctgggagtctcgtgagtgaaaacatctgaagttcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188292 True 277 lncRNA 0.39 1 59100482 59100758

Neighbor

gene id symbol gene type direction distance location
LOC110492721 LOC106561036 coding upstream 67115 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 777931 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 803736 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 989302 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 991039 58040338 ~ 58109443 (+)
LOC118937284 LOC106609580 coding downstream 287192 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 301419 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 371413 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 673405 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 799372 59900130 ~ 59922883 (+)
G165131 NA non-coding upstream 3901 59096357 ~ 59096581 (+)
G165122 NA non-coding upstream 9958 59090199 ~ 59090524 (+)
G164847 NA non-coding upstream 111912 58983575 ~ 58988570 (+)
G165141 NA non-coding downstream 122 59100880 ~ 59101358 (+)
G165209 NA non-coding downstream 50700 59151458 ~ 59151664 (+)
G165368 NA non-coding downstream 180335 59281093 ~ 59281298 (+)
G165380 NA non-coding downstream 187322 59288080 ~ 59288292 (+)
G165385 NA non-coding downstream 190248 59291006 ~ 59291426 (+)
G163660 LOC106561040 other upstream 884099 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1168491 57928150 ~ 57931991 (+)
G162130 NA other upstream 2046840 57048314 ~ 57053642 (+)
G161687 NA other upstream 2847884 56245044 ~ 56252598 (+)
G160569 NA other upstream 3153237 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 844950 59945708 ~ 59953165 (+)
G166878 NA other downstream 1414874 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1750674 60851417 ~ 60866455 (+)
G167288 NA other downstream 1961835 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 2131438 61232196 ~ 61232545 (+)

Expression


Co-expression Network