G165141


Basic Information

Item Value
gene id G165141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59100880 ~ 59101358 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188294
aaagcatatatttcacttgtgattttcatgaataggaagattttctaggaagatttatgtccgttgcgttatgctaattagtgtcagatgatgacaacggtcccgttcacgggatggggtgtcactacaggttaacataaatcttcaataatgttccaaccggagaattcctttgtctgtagaagaGCAatgagctacctctcatgtgattGCGCGTGACCAGCTCCTGGCaatctgccagaccactgactcaaagagcccttatgtaGAAGTAGAAgccagtagaagcctcaaacaagtttctaaagacggttgacatctggtggaagccttaggaagtgcaacatgaccaatatcccactgtgtcttCAATTGGGAATGAGTtaaaaatcgaccaacctcagattccCCACCtcttggttggattttttctcaggtttttgcctgccatatgagttctgttatactcacagatatca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188294 True 479 lncRNA 0.45 1 59100880 59101358

Neighbor

gene id symbol gene type direction distance location
LOC110492721 LOC106561036 coding upstream 67513 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 778329 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 804134 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 989700 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 991437 58040338 ~ 58109443 (+)
LOC118937284 LOC106609580 coding downstream 286592 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 300819 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 370813 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 672805 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 798772 59900130 ~ 59922883 (+)
G165139 NA non-coding upstream 122 59100482 ~ 59100758 (+)
G165131 NA non-coding upstream 4299 59096357 ~ 59096581 (+)
G165122 NA non-coding upstream 10356 59090199 ~ 59090524 (+)
G164847 NA non-coding upstream 112310 58983575 ~ 58988570 (+)
G164792 NA non-coding upstream 180216 58912088 ~ 58920664 (+)
G165209 NA non-coding downstream 50100 59151458 ~ 59151664 (+)
G165368 NA non-coding downstream 179735 59281093 ~ 59281298 (+)
G165380 NA non-coding downstream 186722 59288080 ~ 59288292 (+)
G165385 NA non-coding downstream 189648 59291006 ~ 59291426 (+)
G165388 NA non-coding downstream 191371 59292729 ~ 59293090 (+)
G163660 LOC106561040 other upstream 884497 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1168889 57928150 ~ 57931991 (+)
G162130 NA other upstream 2047238 57048314 ~ 57053642 (+)
G161687 NA other upstream 2848282 56245044 ~ 56252598 (+)
G160569 NA other upstream 3153635 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 844350 59945708 ~ 59953165 (+)
G166878 NA other downstream 1414274 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1750074 60851417 ~ 60866455 (+)
G167288 NA other downstream 1961235 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 2130838 61232196 ~ 61232545 (+)

Expression


Co-expression Network