G165380


Basic Information

Item Value
gene id G165380
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59288080 ~ 59288292 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188536
gttagagacctggcagtgtggtgccaggacaagaacctctccctctatgtgagcaagacaaaggagctgatcgtggactacagtaaaaggcaggccgaacaggcccccgttaacatcgacgggtctgtagtggagctgtttgagagtttcaagttccttggtgtccacatcaccaacaaactatcatggtccaaatacaccaagacagtcgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188536 True 213 lncRNA 0.44 1 59288080 59288292

Neighbor

gene id symbol gene type direction distance location
LOC110492721 LOC106561036 coding upstream 254713 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 965529 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 991334 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 1176900 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 1178637 58040338 ~ 58109443 (+)
LOC118937284 LOC106609580 coding downstream 99658 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 113885 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 183879 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 485871 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 611838 59900130 ~ 59922883 (+)
G165368 NA non-coding upstream 6782 59281093 ~ 59281298 (+)
G165209 NA non-coding upstream 136416 59151458 ~ 59151664 (+)
G165141 NA non-coding upstream 186722 59100880 ~ 59101358 (+)
G165139 NA non-coding upstream 187322 59100482 ~ 59100758 (+)
G165131 NA non-coding upstream 191499 59096357 ~ 59096581 (+)
G165385 NA non-coding downstream 2714 59291006 ~ 59291426 (+)
G165388 NA non-coding downstream 4437 59292729 ~ 59293090 (+)
G165395 NA non-coding downstream 10600 59298892 ~ 59299137 (+)
G165397 NA non-coding downstream 11447 59299739 ~ 59300696 (+)
G165404 NA non-coding downstream 21724 59310016 ~ 59310219 (+)
G163660 LOC106561040 other upstream 1071697 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1356089 57928150 ~ 57931991 (+)
G162130 NA other upstream 2234438 57048314 ~ 57053642 (+)
G161687 NA other upstream 3035482 56245044 ~ 56252598 (+)
G160569 NA other upstream 3340835 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 657416 59945708 ~ 59953165 (+)
G166878 NA other downstream 1227340 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1563140 60851417 ~ 60866455 (+)
G167288 NA other downstream 1774301 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1943904 61232196 ~ 61232545 (+)

Expression


Co-expression Network