Gene
RNA
| Item | Value |
|---|---|
| gene id | G165386 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 59291001 ~ 59291390 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188542 | True | 390 | lncRNA | 0.47 | 1 | 59291001 | 59291390 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492691 | LOC106561037 | coding | downstream | 901700 | 58355406 ~ 58389301 (-) |
| LOC110492633 | LOC106561040 | coding | downstream | 1042828 | 58208496 ~ 58248173 (-) |
| LOC110492612 | LOC106561041 | coding | downstream | 1090357 | 58118987 ~ 58200644 (-) |
| LOC110492624 | NA | coding | downstream | 1096079 | 58186283 ~ 58194922 (-) |
| LOC110492572 | ptpn5 | coding | downstream | 1265003 | 57998305 ~ 58025998 (-) |
| LOC110492741 | LOC106561034 | coding | upstream | 52769 | 59344159 ~ 59356495 (-) |
| LOC110492772 | LOC106561030 | coding | upstream | 525335 | 59816725 ~ 59823875 (-) |
| LOC110492782 | LOC106561029 | coding | upstream | 535234 | 59826624 ~ 59841614 (-) |
| LOC110492793 | LOC106561028 | coding | upstream | 581527 | 59872917 ~ 59885714 (-) |
| LOC110492804 | lmod2 | coding | upstream | 645531 | 59936921 ~ 59948593 (-) |
| G165331 | NA | non-coding | downstream | 38870 | 59251929 ~ 59252131 (-) |
| G165245 | NA | non-coding | downstream | 104932 | 59185617 ~ 59186069 (-) |
| G165226 | NA | non-coding | downstream | 122459 | 59168338 ~ 59168542 (-) |
| G165219 | LOC106581772 | non-coding | downstream | 128144 | 59162637 ~ 59162857 (-) |
| G165214 | NA | non-coding | downstream | 135131 | 59155644 ~ 59155870 (-) |
| G165605 | NA | non-coding | upstream | 4433 | 59295823 ~ 59296045 (-) |
| G165609 | NA | non-coding | upstream | 8688 | 59300078 ~ 59300387 (-) |
| G165651 | NA | non-coding | upstream | 72069 | 59363459 ~ 59365028 (-) |
| G165712 | NA | non-coding | upstream | 156680 | 59448070 ~ 59448337 (-) |
| G165728 | NA | non-coding | upstream | 173719 | 59465109 ~ 59465330 (-) |
| G164037 | NA | other | downstream | 1115913 | 58173659 ~ 58175088 (-) |
| G164003 | NA | other | downstream | 1172780 | 58111341 ~ 58118221 (-) |
| G163839 | LOC106561050 | other | downstream | 1501618 | 57776469 ~ 57789383 (-) |
| G165742 | NA | other | upstream | 190567 | 59481957 ~ 59482314 (-) |
| G165746 | NA | other | upstream | 196071 | 59487461 ~ 59487840 (-) |
| G166541 | NA | other | upstream | 628488 | 59919878 ~ 59920330 (-) |
| G166794 | LOC106561021 | other | upstream | 1110958 | 60402348 ~ 60406808 (-) |
