G165385


Basic Information

Item Value
gene id G165385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59291006 ~ 59291426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188541
actctgcatcgttgggaatggctcgtgttggggaataatcagaattagttggtaacataggtaagatgttttatattcatcatatgtttgtaagttacttctcatcagaatgttatttttgtataatactgtggcgggttgcagtatctgttctatgtcaagactaagttgcttgggccggagagaggggagaggtcaagcgtgtatctcttggctccacaatgtctgtgtgccagtcagtgtgtctctgtgatcttgtcaagataggatggatttgatatatgcctgttgatatggaggattggtttatggttctgagtttgagaaaataacttagtttaggagacaaagctgaacgataaattatgcctatgctgtctcactatgtgtgtctttgctataaagaaTCTCAGTTACAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188541 True 421 lncRNA 0.44 1 59291006 59291426

Neighbor

gene id symbol gene type direction distance location
LOC110492721 LOC106561036 coding upstream 257639 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 968455 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 994260 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 1179826 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 1181563 58040338 ~ 58109443 (+)
LOC118937284 LOC106609580 coding downstream 96524 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 110751 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 180745 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 482737 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 608704 59900130 ~ 59922883 (+)
G165380 NA non-coding upstream 2714 59288080 ~ 59288292 (+)
G165368 NA non-coding upstream 9708 59281093 ~ 59281298 (+)
G165209 NA non-coding upstream 139342 59151458 ~ 59151664 (+)
G165141 NA non-coding upstream 189648 59100880 ~ 59101358 (+)
G165139 NA non-coding upstream 190248 59100482 ~ 59100758 (+)
G165388 NA non-coding downstream 1303 59292729 ~ 59293090 (+)
G165395 NA non-coding downstream 7466 59298892 ~ 59299137 (+)
G165397 NA non-coding downstream 8313 59299739 ~ 59300696 (+)
G165404 NA non-coding downstream 18590 59310016 ~ 59310219 (+)
G165409 NA non-coding downstream 24754 59316180 ~ 59381788 (+)
G163660 LOC106561040 other upstream 1074623 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1359015 57928150 ~ 57931991 (+)
G162130 NA other upstream 2237364 57048314 ~ 57053642 (+)
G161687 NA other upstream 3038408 56245044 ~ 56252598 (+)
G160569 NA other upstream 3343761 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 654282 59945708 ~ 59953165 (+)
G166878 NA other downstream 1224206 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1560006 60851417 ~ 60866455 (+)
G167288 NA other downstream 1771167 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1940770 61232196 ~ 61232545 (+)

Expression


Co-expression Network