G165397


Basic Information

Item Value
gene id G165397
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59299739 ~ 59300696 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188553
ATActacactgaagaaaaatatgaatgcaacatgtaaagtgttggtcccatgtttcatgagctgagatAAAAgaacccagaaatgttccatatacacaaaaagcttatttctctcaaatgctgtacacaaatgtgtttacatccctgttagtgagcatttctccttggccaagataatccattcacctgacaggtgtggtatatcaagaagatgattaaacagcatgatcattacacaggtgcaccttgtgctggggaccatAACATGCCACTATaaaatttgcagttttgtcacataacacaacaTACATGTGACAGTGTTGATGCCAATTCTGTGttctttttttctccctttttttctccctctcaggttttgagggagtgtgcaattggcatgctgactgcaggaatgtccaccagagctgttgccagagaactgaatgataatttctctaccataagccacctctaaCGTCATTTCAGagcatttgaatgcacagaaatacagtGACGAGAGTCTGAGGCCTATTGTGaggccaacagatgcatatctgtattcccaggcatatacccacgtgggtaatTGAAAGATGGAGGTCTCCAGGCCAGTTGGATGCAGTAAGTCATCtaaaagttggttgccaactccATATAAAATCCGCAGAAAAAGAAGACTAGGAGAATACTAGAAACTATCTAGgtttccccttttatctgtggattaattgtcagagtagagaccACACGATTTTGTGTGACTCAAAATGGGTTGATATTCTTGTACATTTCAGGTACAATAACACCTGAATGTTTATACTATAGGACAAATTATCTAGAAACAGAAGGATGTTTCATATGTGAATGTTTCATAtttgcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaaaacttttttgccccactgtaaattgtaatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188553 True 958 lncRNA 0.39 1 59299739 59300696

Neighbor

gene id symbol gene type direction distance location
LOC110492721 LOC106561036 coding upstream 266372 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 977188 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 1002993 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 1188559 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 1190296 58040338 ~ 58109443 (+)
LOC118937284 LOC106609580 coding downstream 87254 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 101481 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 171475 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 473467 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 599434 59900130 ~ 59922883 (+)
G165395 NA non-coding upstream 602 59298892 ~ 59299137 (+)
G165388 NA non-coding upstream 6649 59292729 ~ 59293090 (+)
G165385 NA non-coding upstream 8313 59291006 ~ 59291426 (+)
G165380 NA non-coding upstream 11447 59288080 ~ 59288292 (+)
G165368 NA non-coding upstream 18441 59281093 ~ 59281298 (+)
G165404 NA non-coding downstream 9320 59310016 ~ 59310219 (+)
G165409 NA non-coding downstream 15484 59316180 ~ 59381788 (+)
G165441 NA non-coding downstream 63343 59364039 ~ 59365627 (+)
G165496 NA non-coding downstream 148853 59449549 ~ 59449785 (+)
G163660 LOC106561040 other upstream 1083356 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1367748 57928150 ~ 57931991 (+)
G162130 NA other upstream 2246097 57048314 ~ 57053642 (+)
G161687 NA other upstream 3047141 56245044 ~ 56252598 (+)
G160569 NA other upstream 3352494 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 645012 59945708 ~ 59953165 (+)
G166878 NA other downstream 1214936 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1550736 60851417 ~ 60866455 (+)
G167288 NA other downstream 1761897 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1931500 61232196 ~ 61232545 (+)

Expression


Co-expression Network