G165409


Basic Information

Item Value
gene id G165409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59316180 ~ 59381788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188565
gctcgtacttttccatttgatataggggagaaaccatgtgtccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgatgattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagtttgcgttttgaggactgaattttcggattttttttggtagccaaatgtgatgtataaaacggagctatttctaatacacaaagaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaatgattttatttgaaggcttttatgttgaaatgttgcgtgctggatgctaacgtgctaaatgctaacgctaaatgctaatgctagctagctacttttacacaaatgattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgtttacaaaaggctaagcttgagagatggcatatttatttcatttcatttgcgattttcatgaatagttaacgttgtgttatgctaatgagcttgctgatagatttacacaatcctggatacaggggttttttcatagctaaacgtgacgcagaaaacggagcgatttgtccttaacaaataatctttcaggaaaaactgaacatttgctatctgagagtctcctcattgaaaacatctgaagttcttcaaaggtaaatgattttaattgaatgcttttctgtttttttgtgtaaatgttgccagctgaatgctaatgataaatgctacgctaaatgctacgttagccatcaatactgttacacaaatgcttgttttgcaatggttgagaagcatattttgaaaatctgagatgacagtgttgttaacaaaaggctaagcttgagagtgtcaggtgcgtgaatgaggacccaaaagcgaattaacaaaacagagtttctttaatgacgaaacacacgtaggctcagatggacaggcagattccgacaggacaggacaaggttagatgaacaggcagattccgacaggacaggacaaggttgcagcaaacacgacgatagtctggttcaggcatgagaaacacaaacgagaatccgacaaagacagaagcagaaacagagagagatatagagacctaatcagagggaaaaagggaacaggtgggaaaaggggtgaacgaggtagttagagaagacaaggaacagctgggggaaagaggggaagaaaaggtaacctaatacgaccagcagagggagacagggtgaagagaaagaacaggaacaagacacaacatgacaatacatgacagtacccccccactcacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188565 True 1357 lncRNA 0.38 2 59316180 59381788

Neighbor

gene id symbol gene type direction distance location
LOC110492721 LOC106561036 coding upstream 282813 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 993629 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 1019434 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 1205000 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 1206737 58040338 ~ 58109443 (+)
LOC118937284 LOC106609580 coding downstream 6162 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 20389 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 90383 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 392375 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 518342 59900130 ~ 59922883 (+)
G165404 NA non-coding upstream 5961 59310016 ~ 59310219 (+)
G165397 NA non-coding upstream 15484 59299739 ~ 59300696 (+)
G165395 NA non-coding upstream 17043 59298892 ~ 59299137 (+)
G165388 NA non-coding upstream 23090 59292729 ~ 59293090 (+)
G165385 NA non-coding upstream 24754 59291006 ~ 59291426 (+)
G165496 NA non-coding downstream 67761 59449549 ~ 59449785 (+)
G165501 NA non-coding downstream 72812 59454600 ~ 59454807 (+)
G165510 NA non-coding downstream 90109 59471897 ~ 59472121 (+)
G165514 NA non-coding downstream 101893 59483681 ~ 59483951 (+)
G163660 LOC106561040 other upstream 1099797 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1384189 57928150 ~ 57931991 (+)
G162130 NA other upstream 2262538 57048314 ~ 57053642 (+)
G161687 NA other upstream 3063582 56245044 ~ 56252598 (+)
G160569 NA other upstream 3368935 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 563920 59945708 ~ 59953165 (+)
G166878 NA other downstream 1133844 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1469644 60851417 ~ 60866455 (+)
G167288 NA other downstream 1680805 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1850408 61232196 ~ 61232545 (+)

Expression


Co-expression Network