G165501



Basic Information


Item Value
gene id G165501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59454600 ~ 59454807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU188660
cccccatccacatcgacgagcTGTAGTgtagcgggtcgagagcttccagttccttggcatccacatcactaaggacttaacatgttccacacacacccgcacagtcATGCcaagggcacgacaacacctcatccccctcaggaggctgaaaagatttgtcttgggtcctcagatcctcaaaaagttccacagctgcaccatcaagagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU188660 True 208 lncRNA 0.49 1 59454600 59454807

Neighbor


gene id symbol gene type direction distance location
LOC118937284 LOC106609580 coding upstream 64497 59387950 ~ 59390103 (+)
LOC110492721 LOC106561036 coding upstream 421233 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 1132049 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 1157854 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 1343420 58110123 ~ 58111180 (+)
LOC118941102 NA coding downstream 17364 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 319356 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 445323 59900130 ~ 59922883 (+)
iqub iqub coding downstream 514899 59969706 ~ 59977321 (+)
LOC110501720 cadps2 coding downstream 531258 59986065 ~ 60251097 (+)
G165496 NA non-coding upstream 4815 59449549 ~ 59449785 (+)
LOC110492752 LOC106561032 non-coding upstream 44618 59402177 ~ 59643249 (+)
G165409 NA non-coding upstream 72812 59316180 ~ 59381788 (+)
G165441 NA non-coding upstream 88973 59364039 ~ 59365627 (+)
G165404 NA non-coding upstream 144381 59310016 ~ 59310219 (+)
G165510 NA non-coding downstream 17090 59471897 ~ 59472121 (+)
G165514 NA non-coding downstream 28874 59483681 ~ 59483951 (+)
G165516 NA non-coding downstream 32063 59486870 ~ 59487197 (+)
G165517 NA non-coding downstream 32607 59487414 ~ 59487861 (+)
G165524 NA non-coding downstream 50459 59505266 ~ 59505508 (+)
G163660 LOC106561040 other upstream 1238217 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1522609 57928150 ~ 57931991 (+)
G162130 NA other upstream 2400958 57048314 ~ 57053642 (+)
G161687 NA other upstream 3202002 56245044 ~ 56252598 (+)
G160569 NA other upstream 3507355 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 490901 59945708 ~ 59953165 (+)
G166878 NA other downstream 1060825 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1396625 60851417 ~ 60866455 (+)
G167288 NA other downstream 1607786 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1777389 61232196 ~ 61232545 (+)

Expression



Co-expression Network