G165517


Basic Information

Item Value
gene id G165517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59487414 ~ 59487861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188677
attttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagggtggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaactacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgact

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188677 True 448 lncRNA 0.54 1 59487414 59487861

Neighbor

gene id symbol gene type direction distance location
LOC118941102 NA coding upstream 10069 59472171 ~ 59477345 (+)
LOC118937284 LOC106609580 coding upstream 97311 59387950 ~ 59390103 (+)
LOC110492721 LOC106561036 coding upstream 454047 58797383 ~ 59033367 (+)
LOC110492681 LOC106561133 coding upstream 1164863 58316277 ~ 58322551 (+)
LOC110492647 LOC106561039 coding upstream 1190668 58253604 ~ 58296746 (+)
LOC110492759 gpr37 coding downstream 286302 59774163 ~ 59781857 (+)
LOC110501704 wasl coding downstream 412269 59900130 ~ 59922883 (+)
iqub iqub coding downstream 481845 59969706 ~ 59977321 (+)
LOC110501720 cadps2 coding downstream 498204 59986065 ~ 60251097 (+)
LOC110492825 fezf1 coding downstream 774838 60262699 ~ 60267392 (+)
G165516 NA non-coding upstream 217 59486870 ~ 59487197 (+)
G165514 NA non-coding upstream 3463 59483681 ~ 59483951 (+)
G165510 NA non-coding upstream 15293 59471897 ~ 59472121 (+)
G165501 NA non-coding upstream 32607 59454600 ~ 59454807 (+)
G165496 NA non-coding upstream 37629 59449549 ~ 59449785 (+)
G165524 NA non-coding downstream 17405 59505266 ~ 59505508 (+)
G165555 NA non-coding downstream 68206 59556067 ~ 59556327 (+)
G165569 NA non-coding downstream 103861 59591722 ~ 59591953 (+)
G165570 NA non-coding downstream 106154 59594015 ~ 59594290 (+)
G165572 NA non-coding downstream 108806 59596667 ~ 59597079 (+)
G163660 LOC106561040 other upstream 1271031 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1555423 57928150 ~ 57931991 (+)
G162130 NA other upstream 2433772 57048314 ~ 57053642 (+)
G161687 NA other upstream 3234816 56245044 ~ 56252598 (+)
G160569 NA other upstream 3540169 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 457847 59945708 ~ 59953165 (+)
G166878 NA other downstream 1027771 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1363571 60851417 ~ 60866455 (+)
G167288 NA other downstream 1574732 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1744335 61232196 ~ 61232545 (+)

Expression


Co-expression Network