G165798


Basic Information

Item Value
gene id G165798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59557063 ~ 59557751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188963
gcactgcaggaagctgacgaaccggtccagcgtagatggaccgacaaggtagtgcaggatcttgagggagagacaggagtagtagcgctcaccagtagccctccgcttactgatgagctctggcttttactggacatgaagtgacaaaatgaccagcagaaccgcaatagagacagaggcggttggtgattctccgttccctctccttagtcgagatgcggatacctcccagctgcataggctcagctcccgagccggcagaggaagatggtagtgatgcggagaggggggcaacggagaacgcgagctcctttccacgagctcggtgacgaagatcaacccgtcgctcaatgcgaatagcgagttcaatcagggaatccacgctggaagggacctcccgggagagaatctcatcctttacctctgcgcggagaccctccagaaaacgagcgagcaaggccggctcgttccagccactggaggcagcaagagtgcgaaactcaatagagtagtctgttatggatcgattaccttgacatagggaagacagggccctggaagcctcctccccaaaaacagatcgatcaaaaacccgtatcatctcctccttaaagtcctgatactggttagtacactcagcccttgcctcccagattgccgtgccccactcacgagcccgtccaataagg

Function

NR:

description
Retrotransposon-derived protein PEG10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188963 True 689 lncRNA 0.55 1 59557063 59557751

Neighbor

gene id symbol gene type direction distance location
LOC110492741 LOC106561034 coding downstream 200568 59344159 ~ 59356495 (-)
LOC110492691 LOC106561037 coding downstream 1167762 58355406 ~ 58389301 (-)
LOC110492633 LOC106561040 coding downstream 1308890 58208496 ~ 58248173 (-)
LOC110492612 LOC106561041 coding downstream 1356419 58118987 ~ 58200644 (-)
LOC110492772 LOC106561030 coding upstream 258974 59816725 ~ 59823875 (-)
LOC110492782 LOC106561029 coding upstream 268873 59826624 ~ 59841614 (-)
LOC110492793 LOC106561028 coding upstream 315166 59872917 ~ 59885714 (-)
LOC110492804 lmod2 coding upstream 379170 59936921 ~ 59948593 (-)
LOC110492814 asb15 coding upstream 394241 59951992 ~ 59963149 (-)
G165752 NA non-coding downstream 60558 59496270 ~ 59496505 (-)
G165744 NA non-coding downstream 73120 59483727 ~ 59483943 (-)
G165737 NA non-coding downstream 79748 59476812 ~ 59477315 (-)
G165728 NA non-coding downstream 91733 59465109 ~ 59465330 (-)
G165712 NA non-coding downstream 108726 59448070 ~ 59448337 (-)
G165802 NA non-coding upstream 8552 59566303 ~ 59568461 (-)
G165811 NA non-coding upstream 26713 59584464 ~ 59584801 (-)
G165812 NA non-coding upstream 27466 59585217 ~ 59590695 (-)
G165822 NA non-coding upstream 49559 59607310 ~ 59607665 (-)
G165831 NA non-coding upstream 63539 59621290 ~ 59621513 (-)
G165746 NA other downstream 69223 59487461 ~ 59487840 (-)
G165742 NA other downstream 74749 59481957 ~ 59482314 (-)
G164037 NA other downstream 1381975 58173659 ~ 58175088 (-)
G166541 NA other upstream 362127 59919878 ~ 59920330 (-)
G166794 LOC106561021 other upstream 844597 60402348 ~ 60406808 (-)
G166877 LOC106613263 other upstream 957475 60515226 ~ 60515522 (-)
LOC110492890 LOC106561126 other upstream 982438 60537619 ~ 60559746 (-)

Expression


Co-expression Network