G165812


Basic Information

Item Value
gene id G165812
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59585217 ~ 59590695 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU188978
cttccggctttcacccccagtctaacggtcaagcagaacgggccaatcagactattggtcgcatcttacgcagtctttcttttcgcaaccctgcgtcttggtcagaacagctcccctgggcagaatacgcccacaactcgcttccttcgtctgcgaccgggctatctccttttcagagtagcctcgggtaccagcctccgttgttctcatctcagttcgccgagtccagcgtcccctccgctcaggcttttgtccaacgttgcgagcgcacctggaagagggtcaggtctgcactttgccgttatagggcgcagactgtgagagctgctaataagcgtagaactaagagccctagatattgtcgcggtcagagagtttggctctccactcagaaccttccccttaagacggcttctcgcaagttgaccccgcggttcattggtccattc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109200937 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188978 True 449 lncRNA 0.46 2 59585217 59590695

Neighbor

gene id symbol gene type direction distance location
LOC110492741 LOC106561034 coding downstream 228722 59344159 ~ 59356495 (-)
LOC110492691 LOC106561037 coding downstream 1195916 58355406 ~ 58389301 (-)
LOC110492633 LOC106561040 coding downstream 1337044 58208496 ~ 58248173 (-)
LOC110492612 LOC106561041 coding downstream 1384573 58118987 ~ 58200644 (-)
LOC110492772 LOC106561030 coding upstream 226030 59816725 ~ 59823875 (-)
LOC110492782 LOC106561029 coding upstream 235929 59826624 ~ 59841614 (-)
LOC110492793 LOC106561028 coding upstream 282222 59872917 ~ 59885714 (-)
LOC110492804 lmod2 coding upstream 346226 59936921 ~ 59948593 (-)
LOC110492814 asb15 coding upstream 361297 59951992 ~ 59963149 (-)
G165811 NA non-coding downstream 416 59584464 ~ 59584801 (-)
G165802 NA non-coding downstream 16756 59566303 ~ 59568461 (-)
G165798 NA non-coding downstream 27466 59557063 ~ 59557751 (-)
G165752 NA non-coding downstream 88712 59496270 ~ 59496505 (-)
G165744 NA non-coding downstream 101274 59483727 ~ 59483943 (-)
G165822 NA non-coding upstream 16615 59607310 ~ 59607665 (-)
G165831 NA non-coding upstream 30595 59621290 ~ 59621513 (-)
G165845 NA non-coding upstream 54749 59645444 ~ 59645657 (-)
G165846 NA non-coding upstream 55763 59646458 ~ 59646672 (-)
G165847 NA non-coding upstream 56379 59647074 ~ 59647370 (-)
G165746 NA other downstream 97377 59487461 ~ 59487840 (-)
G165742 NA other downstream 102903 59481957 ~ 59482314 (-)
G164037 NA other downstream 1410129 58173659 ~ 58175088 (-)
G166541 NA other upstream 329183 59919878 ~ 59920330 (-)
G166794 LOC106561021 other upstream 811653 60402348 ~ 60406808 (-)
G166877 LOC106613263 other upstream 924531 60515226 ~ 60515522 (-)
LOC110492890 LOC106561126 other upstream 949494 60537619 ~ 60559746 (-)

Expression


Co-expression Network