G165946


Basic Information

Item Value
gene id G165946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59800058 ~ 59800342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU189128
ataccccataatgacaaagcgataaacagaaataccttatttacataaatattcagacctaTTGCtaagagactcaaaattgagttcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagttcacctgtggtaaattccattgattggacatgatttggaaataaaAATGcaccgaaaacaacaggtgtaaaccttacagtgaaatggttacttacaagcccttaaccaacaatgcagttttaagaaaaataactgttaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189128 True 285 lncRNA 0.46 1 59800058 59800342

Neighbor

gene id symbol gene type direction distance location
LOC110492759 gpr37 coding upstream 18201 59774163 ~ 59781857 (+)
LOC110492752 LOC106561032 coding upstream 156809 59402177 ~ 59643249 (+)
LOC118941102 NA coding upstream 322713 59472171 ~ 59477345 (+)
LOC118937284 LOC106609580 coding upstream 409955 59387950 ~ 59390103 (+)
LOC110492721 LOC106561036 coding upstream 766691 58797383 ~ 59033367 (+)
LOC110501704 wasl coding downstream 99788 59900130 ~ 59922883 (+)
iqub iqub coding downstream 169364 59969706 ~ 59977321 (+)
LOC110501720 cadps2 coding downstream 185723 59986065 ~ 60251097 (+)
LOC110492825 fezf1 coding downstream 462357 60262699 ~ 60267392 (+)
LOC110501735 NA coding downstream 474042 60274384 ~ 60288852 (+)
G165588 NA non-coding upstream 182022 59617813 ~ 59618036 (+)
G165580 NA non-coding upstream 192425 59607405 ~ 59607633 (+)
G165572 NA non-coding upstream 202979 59596667 ~ 59597079 (+)
G165570 NA non-coding upstream 205768 59594015 ~ 59594290 (+)
G165569 NA non-coding upstream 208105 59591722 ~ 59591953 (+)
G165967 NA non-coding downstream 36484 59836826 ~ 59837031 (+)
G165971 NA non-coding downstream 41073 59841415 ~ 59841623 (+)
G165974 NA non-coding downstream 42727 59843069 ~ 59843273 (+)
G165979 NA non-coding downstream 50575 59850917 ~ 59851116 (+)
G165981 NA non-coding downstream 51579 59851921 ~ 59852129 (+)
G163660 LOC106561040 other upstream 1583675 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 1868067 57928150 ~ 57931991 (+)
G162130 NA other upstream 2746416 57048314 ~ 57053642 (+)
G161687 NA other upstream 3547460 56245044 ~ 56252598 (+)
G160569 NA other upstream 3852813 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 145366 59945708 ~ 59953165 (+)
G166878 NA other downstream 715290 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 1051090 60851417 ~ 60866455 (+)
G167288 NA other downstream 1262251 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1431854 61232196 ~ 61232545 (+)

Expression


Co-expression Network