Gene
RNA
| Item | Value |
|---|---|
| gene id | G166080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 59801766 ~ 59802012 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| conserved oligomeric Golgi complex subunit 4 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU189266 | True | 247 | lncRNA | 0.34 | 1 | 59801766 | 59802012 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492741 | LOC106561034 | coding | downstream | 445271 | 59344159 ~ 59356495 (-) |
| LOC110492691 | LOC106561037 | coding | downstream | 1412465 | 58355406 ~ 58389301 (-) |
| LOC110492633 | LOC106561040 | coding | downstream | 1553593 | 58208496 ~ 58248173 (-) |
| LOC110492612 | LOC106561041 | coding | downstream | 1601122 | 58118987 ~ 58200644 (-) |
| LOC110492772 | LOC106561030 | coding | upstream | 14713 | 59816725 ~ 59823875 (-) |
| LOC110492782 | LOC106561029 | coding | upstream | 24612 | 59826624 ~ 59841614 (-) |
| LOC110492793 | LOC106561028 | coding | upstream | 70905 | 59872917 ~ 59885714 (-) |
| LOC110492804 | lmod2 | coding | upstream | 134909 | 59936921 ~ 59948593 (-) |
| LOC110492814 | asb15 | coding | upstream | 149980 | 59951992 ~ 59963149 (-) |
| G165847 | NA | non-coding | downstream | 154396 | 59647074 ~ 59647370 (-) |
| G165846 | NA | non-coding | downstream | 155094 | 59646458 ~ 59646672 (-) |
| G165845 | NA | non-coding | downstream | 156109 | 59645444 ~ 59645657 (-) |
| G165831 | NA | non-coding | downstream | 180253 | 59621290 ~ 59621513 (-) |
| G165822 | NA | non-coding | downstream | 194101 | 59607310 ~ 59607665 (-) |
| G166081 | NA | non-coding | upstream | 1835 | 59803847 ~ 59804053 (-) |
| G166099 | NA | non-coding | upstream | 28797 | 59830809 ~ 59831085 (-) |
| G166105 | NA | non-coding | upstream | 41313 | 59843325 ~ 59843603 (-) |
| G166550 | LOC106581475 | non-coding | upstream | 130473 | 59932485 ~ 59998041 (-) |
| G165746 | NA | other | downstream | 313926 | 59487461 ~ 59487840 (-) |
| G165742 | NA | other | downstream | 319452 | 59481957 ~ 59482314 (-) |
| G164037 | NA | other | downstream | 1626678 | 58173659 ~ 58175088 (-) |
| G166541 | NA | other | upstream | 117866 | 59919878 ~ 59920330 (-) |
| G166794 | LOC106561021 | other | upstream | 600336 | 60402348 ~ 60406808 (-) |
| G166877 | LOC106613263 | other | upstream | 713214 | 60515226 ~ 60515522 (-) |
| LOC110492890 | LOC106561126 | other | upstream | 738177 | 60537619 ~ 60559746 (-) |
