G166131 (lmod2)


Basic Information

Item Value
gene id G166131
gene name lmod2
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 59945708 ~ 59953165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU189317
CTTTTGAGTGATCTAATGCTGCTACCACGAATGGCCGCCATCAGATCATCACGTGTAGAGTTCAGAGGTGCTGGTGGCCGGGGTGGGTTGTCTTTCTTCTTTCGTGAAGAAGGCTTCAAGGCATTCTTCAGCTCCTTGAGAATGTCAGAGCTGCACTTCTTGTTGGCCCCATTTTTGCCCCTCTTGGATTTGGGTTTCTTTTGGCCTGATTGACCCTTTGTACTCCCTTCATGTTGTTTGATCATCTCTGCAATCTTCCTGGTTGGTGTATTCCTCTCAGACTGAAGGTcagtgagagggggaggtggaggagggatgttATTTGGGGTCTGGTCATTCCTCGCATGTCTTGGAGAGAACCAGGGTGGTTTGTTTGAAGGAGGCGATCCAGAAAGGCCTGTTGTCCCGGCATCGGCCTTGGGCTGGACTGTTGCTTCTGGATGGCCTTTCTCCCTCTGTTGTTGCAGCCATCTCTGCCTCTGTCGGTCCTGGTTGCGGGTCAGAATACTGGTGGCGGTCATCCTGGGGCCTGGCAGATCAAACTGGTAGCCCAGCTTGAGGAGGGTGCAGTTGTCCCTCAGGAGGCGAACCATCTCCATCTCAACCTGCCCCCCGCAGATGTGCCTCTGGTTGTGGAAGCGCAGCTCCACCAGAGTACTGTTTTGTTGGAGCGATGCCATTAGCGCCAAGATTCCCCGGCCAGACACAAAGTTGGACTCAATGTTGAGGTTGGTGATGGAGCAGTTTTCTCTGAGCATCTTGGAGACGGCGAAGGCAACCCGGTCATTGGCTCGGGTGTTAGAAAGGCTTAAAACACGTACGTGTGTGTTGGCGCTCAGTGCTTCGGAGATACGCAGCAAGGTCTCCTGAGAGATGTCTTCGATGTTGTTGAAGTTGAGCTCGCTCATCGTTGGATCATCGCGAAGGATCCGTTCAAGTGCCTCGTCAATCACGATAGGGTTCCCACAAGGTCTCTCTGGAGTCACATTTAGGTTTTGGTCAGTCATTGTTGTTCTCAAGTCTCCCCTTTCAGAACAATTCCCTAGGTTTCTTGACAGGTGGTCAACAGCGTTCTGCCCATGTCTACCAGAAGTTGGTAAAGGTTCCTGTTTGCATTTGTCCTTCTTTTCCTCTTCATTTTCAGCCTCAATTGAATCATTCTCATCCTCACCTGCCTCGTCTCCGCTCCCTTCCCTTCTATTTTGGcgttcctcttcctcatcactgtccTCAGACTCTGTGCTGTTactgtcactctctgtcacacATTCCTCTTCGCTCTTATCAGTCTGTCCTTCCTCCATTCTATCCTGTATTTTTGAACAGGGTGGAAAATTAGGTTGAGACCTAACATTCTCCAGTTACTGTCTCTTAATGAGGAATACCTCCAGAACTCTTTGAGCACACATAATCATTATAGCTGGTATTTCAGagacaatgtattttttttattgttttccaCTAACTTATCAAAATAACACAGTAGGCAATGAACACAGTCTTCATATTGTTTGAACTCTTATACAACGATAAATGTTTGGCACACTTCATTTGCATATATACTTCAACCTTTCCCTTAACCTCTGGCATTTCTTATAATCTTCAATCATTCTTATTTAAAATATTGAATCTCAAATTATTGTCATTTCTATCATtggaaaaaataaaaacataatctGTCTTTATCTTTTATTTTCAGATAGGCTGGTGGCAAAAGGTAATTTATCTGTAAAATTATACTGTAATGCAGAATATAAGTAATCGGCCATTTCAATCAGCGAGACACTGAATTCCAAAGATGTCCCTGCTATTTCACAATtagaaatgaaataaataaacctTTTCAAGTTACACCTGAAATATTTAAGTTTGATTGAAAtaaattttatttttttcatcaccgAAATAGGAAAAATGTTGTTAAGGAGTCAGACATAACAACCtaacttcagattgttttgttcTGCCAATATTTGTTGAGATGCCTGAAATTGATCTTGTTGCATCTGGAAGCCCTCTGAAGTTAAGGCATCTatagaataatatatatatatttgttttctcTGGTTTAAGCCTTGAAATACCATCCCCTTTCTTACATGTTCAGGAGATGATTCAGATCTGTCATCCTCTAGCAGTTTGCGTGTCTCGTCCTCCCAGTATTTCAGCAGTGCCTCTCTGGAGAAGGTGCCTGTGGGGGTCTTGGCAGTCTGGTCTTTCTGCCTCAGCCCGATAGGTACGTTGTCATCCGGGTCCATATCCGCCAGCTCCCTCTCCAGCTCCTGAAGCTCCTCAAACGACAAGCCAGCCAACACCTCATCTTCATCCACTGATTCATACTTCTTCAGCTCCTTTCGGTACCCAAAGGTACTCATGATGGACTTGTTAGAAACGCTTGGATCTTAGTGAGGATCTTTTTCAACTGAATCTCCGCACACTCTCTAAAAGCTACTGGGTAATGGTAAAGGCGTGTGGCCAGGGATGCTGTAGATGTAGGGAGTCTGAGAGGAAGACTGATGGTGAAAGAGAGAGTCTGTTTGTCTAATCTTCCCAGCTGCCATAAGACCCTCAAAGGGAGGGAAATGTGTAAAGTGTCTGCCAATGATGTTCTTTTTTTAGGGTGTGGGGATCAACAAGATAGGTTTACAGGAGCAATGTGAGGACACTTAGTGGCTCTGAAGAGACCTATCACTATAGCTCATACCCAGGGAGAAAAAAATAGACCAACAAAGCCCGAGGGAGACATCAAAGATTAACGTGAATGGTGTTACATAATGTGTCAGAACATGCAGTACAGGTtgttgggtaaaaaaaaacagaggaggaggaagaagatgatgaacaaaaacaaaggaaaaatGGGTATCTGTTTAGAGGGAGTAGACAAAACTACAATAATGGAAGAAGAACAAAAGaaagtataaaaatatatataaaaaaatggacACTGAATAAAGAAGGACAAATTGTCAATCCATTGCAATATAGTGGCTCTCTAAGCAGCTGATGTGTCAATTCTTAAATTGCGGTTGCATTTCCAGTCCTCACTTttgcaaccatgaaaaacagtttATCAATTTTTAAACATAATGCAAGTCCTTTACACCACAAAACTTTATTGTTCATACATTGTTTAATGTACTTAGGGCAAGCAAATTGGCTTGTCCAAGTATCATTATAGTGACATGTTTTGTGAATTTATAGTTATCTATCTATTCTTTTGAATGCCACTAGAAAGTAAACAAACGTGTGTAATATTTTGTATAGCGCAATAAAAACAAAGATGAGTCTGAGCATGCCTGGCAGGATTGGTCCAACAAAGCTAAAGACCCCAGATGGGAGAGTATAATATACAAGGATTTTCTCAAACTGCTAAAGCATGTTGACGACATCGTACTTAGCCAGTGGGAATTCGCTGGAGTACCCCCACCCAGGTTGTGGCCGTGCTGGCACCACTGGCTGTGGTAACCcatgggcggggggggggggggggggttacacacTCGGACAATCAGAGAGGGGGCAAATTATTGTAGCCCTGGCAGCACAGATTAATCAAACGGACTGAGTTCCATCAGCTAAGACTAGACATTGTTTAATCAAATCTTACCATTCCTCCTCAATTTGTCATGCCTTCTCAAATAGCTACAATGGTATACACATTTAACACATCAGGTCAACCCTCGAGTTGGGCTCGGGGATGGAACAAttgttgaaggtgtgtgtgtggttgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgcgcgcaaggGGGTTAtaggcgtggggggggggggttataagtTGGTTATAGGTTGGTCCATGGGTGGAAGGGAAGAGaggtgtttgtgtgggtgggtgggttattaaaataccttttttatatatatatatatatatatatacagtacaaccGAGGAAAAAGCGCTAGAAATGCTGTTGGCTTCTAATCTGGTTTTGTTCTGTAGGTGGCACCTTGTGCTCTTTTCAAGGGGTGAGGCCAATCTCTTAAAGGCCCTAGGATCCATGTGTACAGGGATGGTCTGCCAGTCACCTAGACGACAACCCAACTTGGGATGGGGGGATGTTTTAGGGGGTGAAAAATTGGAggacaattggaggtttactcaGTCATAGTTACAGTATGCTGCTTAACAGTGCAGATATCATGGTACGCTATTTGGGCGTTCAGTCATCTTGGTACTTTTTAATGGTAAGTTTACAAACATATTATTGTAAGTATAATTGAAACGTGtatctcattatggtaagtggtgaaataagtatagctagttataattgtaatggctaAGCAGATGATAAGAAAAGACGATTGGTCTTTACCTGGCTAATAGAGAaagaatataatatctattgtttacatgAAAATCATTCCACATCTTTAGATTAAGTTGTGTGTAAAAGGGACTGGGAGAGGGGGATGATATACGTCTCTCATGGTCAAAGAAACTCAAAaggggtgatgatattaattCAAAAATAATTCAAAAAGAATGTGCTAAATGTCCAAACAGCTCGGCAAGGAAGGTGGATCTTTTTAAATATGCTAATGGCCGTTATCAGATTTGTCTCATTAATCTATAcagtccaaataatgatgatccacactTCTTTGAAATATATATCATATTTTATCTAACTTACAGGCAATACCCAACTCTAATATTAAATACCTCAATGTTctgtaaaggaaatcacactacaaactatcccCCTCATGCACTtaaatcacaaatattatggacatATTAGAACTAGTGGTTATATGGAGGCtcaaatatcctgacctagtgagatatacagtacatggagGAGGCTCAATCGAGCTAGTCGTCTTGAATACTTTCTTATGTAATTCTCGCTGCTACCAAAAGTTCAAAAAGTGTTCAAAGGGGACAGAATGTGGTCAGACCATCAAATAATTGGCATAcacattactcttacagaatttccacatggccgaggatattggaaatgtaatcaaagcctactggatTACAACTTGTTTTTCACCAAGACACAATcatttataactgactttttcctACATAACAGATCCCCTTTCAAATGTGCCTTCAGAGGTCATGCGATTCAGTACTCATCtttaaaacaaaaaacattttggtCAAAAGTtgatattaacaaaggaaatagaaGAAATAACCGTTCAGAtggatagcaataaaaactggaccatagaggcacagaatatgtttgaggaaaaacaaaaataactggaggaacttattcaagaaaaaatcaagtgtaatatattataaaaataaagccAACTGGATGAAATATGggggaaaatgcaccaaattattaTTAAATCTTCAACATAGTCATCCATGATTCACCAAACAATATATTTAAAGAGGAAGCTAAATAAAAtccatgaccaaaagtatgtggacacctgctcatcgaacatctcattccaagatcatgggcattaatatggagttagtcccttttttgctgctataacagactccactcttctggaaaggctttccactagatgttggaacattgttgcggggacttgcttccattcagccatgagcattagtgaggtcggacaccgatgttgggcaattaggcctggctcgcagtcggtgttctaattcatctcaaaggtgtttgatggagttgaggtcagggctctgtgcaggccagtcaagttcttcctcaccgatctcgacaaaccatttctgtatggacttcgctttgtgcacaggggcattgtcttACTGAAGCAGGAAAAGGCCTCCCTAAATAGTTGCCACAAAGTatgaagcacagaattgtctagaatgtcattgtatactgtcaCGCTAAGATTTTCCtgcactggaactaaggggcctgaaccatgaaaaacagcccaagaccattattcttccttccccaaactttacaattggcactatgcatttgggcagatAGCATTCTCCCGGCATTAGCCAAACCCGgatttgtctgtcagactgccagatggtgaagaaaGATTAATCACTTCAGAGAATGCTTTCCCACAGTAGCAGAGTCCAACagcagcgagctttacactactccagtcCACGATttgcattgcacatggtgatctttggcttgtgtgcggctgctcggccatggaaacccatttcatgaagctcccgacgaacagttcttgtgctgacgttgcttacagaggcagtttggaactcggtagtgagtgttgcaacagttcatataagaaaatccggcgactgaaataaattcattaggcgctaatctacggatttcacatgactgggcagtgggGGAGTCAGCCCCAGCCAATCTGAATTTGTTTTTTCACACAAAtgggatttattacagacagaaatactcctcaatttcatcagctgtccaggtggctggtctcagacaatccctcAGGTGAAGAACTCGGATGTGGAGGTCCCGGGCTGGCTGGTTGCacgtgatctgcggttgtgaggctggttggacatactgccaaattctctaaaatgacctagagaaattaacattaaattctctggcaacgaTTCTGGTGagcattcctacagtcagcatgccaattacattcTCCctcaaacttgagacatctgtggcattgtgttgtgtgacgaaactgcacatttttgagATGCACTTgggtaattatcatgctgtttaatcagctccttgataCATTTGAATCAAATGTAAAAGGCCATTAAGCAGTAAATATTGTAATATGATATAATCTAATATCTATGGCAGTTACTACCCAAACAGGACCTGGCAATGTCCAATTTTGAGTAGATTGACCATGAACAGTTCATGGTCCCATATTCCCCCAGGACGTTTCCATGGGTTCCGCAAAATAGTGAGCATTGGTGTATAGCATAAATGCTAACTTTGCACTCTAGTGGAAGATTACAACATATTGGGTGGACAGTGAAACATCTAATAAACTCTCAGGAAGACAATTGATTGAAGTATGCTACCTCCTCTGGCTCCTgttatgtattttgtattttcaatCCATATAAAATCATTTCTGGTGTTAACATGGTATAATTCTTTCACATGGAAGTCAGAGGTCTGCCGGTCAGGTTAGAGTGCATGTTTGTTGTTTGCACTCCAGGCAATATATGGTTATAATTAGAGTTGACCCGCTTTCACTATCTGTCACTTAAGGAATGCAGGTCATCTGTCACTTAAGGAATGCAGGTCATTCCACTTCACTCAGCAATCAGCATTAACCTCAATGTTTTGATAATCAAAATATTTAATTAGATAGCCAACATCTAGACAGGTGTTAGTTTCAGTTCTAACAATATAATATAAGTTGTTTTAAAAACAACAGCAACATGGGATGAACCTTCTTGCCATGCATTGAATTCACTGTAAA

Function

symbol description
lmod2 Enables actin monomer binding activity and tropomyosin binding activity. Involved in actin nucleation and sarcomere organization. Located in actin filament and sarcomere. Colocalizes with M band.

NR:

description
leiomodin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189317 True 7435 TUCP 0.39 2 59945708 59953165

Neighbor

gene id symbol gene type direction distance location
LOC110501704 wasl coding upstream 22985 59900130 ~ 59922883 (+)
LOC110492759 gpr37 coding upstream 163851 59774163 ~ 59781857 (+)
LOC110492752 LOC106561032 coding upstream 302459 59402177 ~ 59643249 (+)
LOC118941102 NA coding upstream 468363 59472171 ~ 59477345 (+)
LOC118937284 LOC106609580 coding upstream 555605 59387950 ~ 59390103 (+)
iqub iqub coding downstream 16541 59969706 ~ 59977321 (+)
LOC110501720 cadps2 coding downstream 32900 59986065 ~ 60251097 (+)
LOC110492825 fezf1 coding downstream 309534 60262699 ~ 60267392 (+)
LOC110501735 NA coding downstream 321219 60274384 ~ 60288852 (+)
LOC110492846 LOC106561021 coding downstream 445711 60398876 ~ 60406820 (+)
G166122 NA non-coding upstream 72887 59872367 ~ 59872821 (+)
G166121 NA non-coding upstream 74610 59870810 ~ 59871098 (+)
G166120 NA non-coding upstream 75238 59869996 ~ 59870470 (+)
G166119 NA non-coding upstream 77531 59867904 ~ 59868177 (+)
G166259 NA non-coding downstream 114140 60067305 ~ 60127600 (+)
G166370 NA non-coding downstream 308413 60261578 ~ 60261804 (+)
G166381 ptprz1 non-coding downstream 342586 60295751 ~ 60296886 (+)
G166431 NA non-coding downstream 426609 60379774 ~ 60380051 (+)
G163660 LOC106561040 other upstream 1729325 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 2013717 57928150 ~ 57931991 (+)
G162130 NA other upstream 2892066 57048314 ~ 57053642 (+)
G161687 NA other upstream 3693110 56245044 ~ 56252598 (+)
G160569 NA other upstream 3998463 55946143 ~ 55947245 (+)
G166878 NA other downstream 562467 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 898267 60851417 ~ 60866455 (+)
G167288 NA other downstream 1109428 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 1279031 61232196 ~ 61232545 (+)
LOC110510683 LOC106560954 other downstream 1578424 61525283 ~ 61535728 (+)

Expression


Co-expression Network