G166439


Basic Information

Item Value
gene id G166439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 60396986 ~ 60397217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU189655
gctgtgttgcttttacgcgaaacataacattttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgttgtttaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccagaaaggccagatttgtgcaatatacgactgattgttgtcctatgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189655 True 232 lncRNA 0.61 1 60396986 60397217

Neighbor

gene id symbol gene type direction distance location
LOC110501735 NA coding upstream 109362 60274384 ~ 60288852 (+)
LOC110492825 fezf1 coding upstream 129594 60262699 ~ 60267392 (+)
LOC110501720 cadps2 coding upstream 145889 59986065 ~ 60251097 (+)
iqub iqub coding upstream 419665 59969706 ~ 59977321 (+)
LOC110501704 wasl coding upstream 474263 59900130 ~ 59922883 (+)
LOC110492846 LOC106561021 coding downstream 1659 60398876 ~ 60406820 (+)
syt8 LOC106561125 coding downstream 230721 60627938 ~ 60639516 (+)
LOC110492948 LOC106561016 coding downstream 257384 60654601 ~ 60666601 (+)
LOC110492922 LOC106561015 coding downstream 285763 60682980 ~ 60695886 (+)
LOC110492964 LOC106561014 coding downstream 300162 60697379 ~ 60712198 (+)
G166437 NA non-coding upstream 1116 60395634 ~ 60395870 (+)
G166436 NA non-coding upstream 1435 60395293 ~ 60395551 (+)
G166433 NA non-coding upstream 13882 60382896 ~ 60383104 (+)
G166431 NA non-coding upstream 16935 60379774 ~ 60380051 (+)
G166381 ptprz1 non-coding upstream 100100 60295751 ~ 60296886 (+)
G166441 NA non-coding downstream 11943 60409160 ~ 60409394 (+)
G166445 NA non-coding downstream 21214 60418431 ~ 60418652 (+)
G166446 LOC106561020 non-coding downstream 25084 60422301 ~ 60423085 (+)
G166451 NA non-coding downstream 32712 60429929 ~ 60430146 (+)
G166458 NA non-coding downstream 40070 60437287 ~ 60437538 (+)
G166131 lmod2 other upstream 443821 59945708 ~ 59953165 (+)
G163660 LOC106561040 other upstream 2180603 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 2464995 57928150 ~ 57931991 (+)
G162130 NA other upstream 3343344 57048314 ~ 57053642 (+)
G161687 NA other upstream 4144388 56245044 ~ 56252598 (+)
G166878 NA other downstream 118415 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 454215 60851417 ~ 60866455 (+)
G167288 NA other downstream 665376 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 834979 61232196 ~ 61232545 (+)
LOC110510683 LOC106560954 other downstream 1134372 61525283 ~ 61535728 (+)

Expression


Co-expression Network