G166794 (LOC106561021)


Basic Information

Item Value
gene id G166794
gene name LOC106561021
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 60402348 ~ 60406808 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU190051
TACATTTTATTGGTTTTGTGGAGCTCGGAGTTAAGCAAGAAAGTATACACACAGACAATACAGCCATATTTGAATAAGTATTGAAATTCATACAAGCGAGTTGCTGCTTTGGACTTTCCAACCTCTTTACTCCGATTGAAAAGTAGTTTTGCCTCAGTCTTTAAAAATATTCAGTCATGACTCATCTCTTATTGTTAAAAACAGCAGTATTCCACCCAATACCAACCTATGAATATACATCTCTGAGCACTGTACTAATAAGAAAgtggtgtttgaaaaatgctagATACACTGCGACTaacatatatatatcacacatatGTAGTTAGCTATTTGATATAGCAGCAAACCTTGAGTGCAACACCCAAGACACCAATGTAGAAAGTCAAAAAGACTTGATCTCCAGTCCATTTTTACCACCCAAACCCCTTTATTGACAACGTTTAAATGACATACTTAATGTGATACAAGGTGTGTCTTTGTTTTCTATGTATGTATACAGAGGAGTCCCTTAATTGGAGTTGAGGGGTCACGGTACATTCCGTGTCCCCCTCCTAGAGTGTGTGCGTTGCTTGTGGACAGATTTCTGGTTTGGGGACGTCGTGGACAGAACGGTTATGTACACAGCTGTGTGAGCGAAGACGGCAGTTAAAAGTTAATAGCTTTCCCGAAGGAGGCTGCGAGGTTTGCTTCTCTGAAGGCCTCGGACACAGtGGGATGGGCGTGGCAAACTCTGGCGACGTCCTCGCAGGACGCGCCGTACTCCATGGCGAGCGTCGCCTCGTTGATAATCTCTCCTGCCCCACAGCCCAGGATGTGAGCGCCCAATATCCGGTCTGTCTCCTTGTGGCCGAGGATCTTCACCAGGCCATCAGTGTCTGCGTTGGTCTTGGCTCGACTGTTGGCGGCAAATGGGAACTTGCCCACCTTGTAGCTGCTCCTCCGTCTTCCCCACCCATGCCACCTCGGGGTGTGTGTAGACAACAGAGGGGACACAGTTGTAGTCGATGTGCACGCCGCCCCCAGCCATGCCCTCCACGGCCACATCGATCTTGCCGTCGGGCCTCTTGATTGCACCCATGACCTTAGTGCCCAGCTTGAACTTAATACCCTGCTTCTGCAGGATGCGCTGGAAGTTCTTGGAGATCTCCATGTCGATACCCATGCCGCCCACGTGGCCCAGGAACTCCACCGCTGTCACATTGGAGCCCAGACGCTGCCACACTGACCCCTGGAGAACGAGAAGCCAAACAGGATGTTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190051 True 1262 TUCP 0.37 5 60402348 60406808

Neighbor

gene id symbol gene type direction distance location
ptprz1a ptprz1 coding downstream 29706 60293012 ~ 60372642 (-)
LOC110492814 asb15 coding downstream 439199 59951992 ~ 59963149 (-)
LOC110492804 lmod2 coding downstream 453755 59936921 ~ 59948593 (-)
LOC110492793 LOC106561028 coding downstream 516634 59872917 ~ 59885714 (-)
LOC110492782 LOC106561029 coding downstream 560734 59826624 ~ 59841614 (-)
LOC110492857 LOC106561020 coding upstream 13693 60419131 ~ 60437560 (-)
ppp1r3ab LOC106561019 coding upstream 42070 60448878 ~ 60470558 (-)
LOC110492890 LOC106561126 coding upstream 130811 60537619 ~ 60559746 (-)
LOC110492911 LOC106561018 coding upstream 218334 60625142 ~ 60627473 (-)
LOC110493006 LOC106561012 coding upstream 428349 60835157 ~ 60850563 (-)
G166790 NA non-coding downstream 19820 60382240 ~ 60382528 (-)
G166752 NA non-coding downstream 127370 60274737 ~ 60274978 (-)
G166750 NA non-coding downstream 128698 60273392 ~ 60273650 (-)
G166712 NA non-coding downstream 180472 60205896 ~ 60221876 (-)
G166677 NA non-coding downstream 221048 60159455 ~ 60181300 (-)
G166798 NA non-coding upstream 1105 60407913 ~ 60408242 (-)
G166800 NA non-coding upstream 2245 60409053 ~ 60409280 (-)
G166828 NA non-coding upstream 53681 60460489 ~ 60460705 (-)
G166831 NA non-coding upstream 55582 60462390 ~ 60464012 (-)
G166541 NA other downstream 482018 59919878 ~ 59920330 (-)
G165746 NA other downstream 914508 59487461 ~ 59487840 (-)
G165742 NA other downstream 920034 59481957 ~ 59482314 (-)
LOC110492691 LOC106561037 other downstream 2038754 58355406 ~ 58389301 (-)
G166877 LOC106613263 other upstream 108418 60515226 ~ 60515522 (-)
G167723 NA other upstream 271915 60678723 ~ 60679041 (-)
G167706 LOC106561017 other upstream 329163 60695263 ~ 60740351 (-)
G167866 NA other upstream 567954 60974762 ~ 60975021 (-)

Expression


Co-expression Network