G166907


Basic Information

Item Value
gene id G166907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 60549349 ~ 60549557 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU190166
GCCAAGGCCAGGATCCACGTGGCGGAGAGCAGGAAGATCTGTCTCTGATCAACATGCTTAAGGTTGTAGTTGAGTGGAATGGAGACAGCGATGAACCTGAATTAAAATATATACCAGAGAAAAGATTGAGAGGAGCTGTATTCACTATGTTTTCTCTTTGTAGAAGAGAGACATTCATTAATGATTTCCTTTGATCTATCAttatatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190166 True 209 lncRNA 0.40 1 60549349 60549557

Neighbor

gene id symbol gene type direction distance location
LOC110492846 LOC106561021 coding upstream 142529 60398876 ~ 60406820 (+)
LOC110501735 NA coding upstream 261725 60274384 ~ 60288852 (+)
LOC110492825 fezf1 coding upstream 281957 60262699 ~ 60267392 (+)
LOC110501720 cadps2 coding upstream 298252 59986065 ~ 60251097 (+)
iqub iqub coding upstream 572028 59969706 ~ 59977321 (+)
syt8 LOC106561125 coding downstream 78381 60627938 ~ 60639516 (+)
LOC110492948 LOC106561016 coding downstream 105044 60654601 ~ 60666601 (+)
LOC110492922 LOC106561015 coding downstream 133423 60682980 ~ 60695886 (+)
LOC110492964 LOC106561014 coding downstream 147822 60697379 ~ 60712198 (+)
LOC118941118 NA coding downstream 165096 60714653 ~ 60719958 (+)
G166900 NA non-coding upstream 10871 60537821 ~ 60538478 (+)
G166899 NA non-coding upstream 11832 60537221 ~ 60537517 (+)
G166888 NA non-coding upstream 28055 60521083 ~ 60521294 (+)
G166886 NA non-coding upstream 29425 60519669 ~ 60519924 (+)
G166867 NA non-coding upstream 41501 60507630 ~ 60507848 (+)
G166991 NA non-coding downstream 56034 60605591 ~ 60605862 (+)
G167025 NA non-coding downstream 68212 60617769 ~ 60618052 (+)
G167059 NA non-coding downstream 119955 60669512 ~ 60669713 (+)
G167137 NA non-coding downstream 250890 60800447 ~ 60829029 (+)
G167154 NA non-coding downstream 292104 60841661 ~ 60891125 (+)
G166878 NA other upstream 33469 60515632 ~ 60515880 (+)
G166131 lmod2 other upstream 596184 59945708 ~ 59953165 (+)
G163660 LOC106561040 other upstream 2332966 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 2617358 57928150 ~ 57931991 (+)
G162130 NA other upstream 3495707 57048314 ~ 57053642 (+)
LOC110493059 LOC100194658 other downstream 301875 60851417 ~ 60866455 (+)
G167288 NA other downstream 513036 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 682639 61232196 ~ 61232545 (+)
LOC110510683 LOC106560954 other downstream 982032 61525283 ~ 61535728 (+)
G167609 LOC106560954 other downstream 1177402 61726959 ~ 61727454 (+)

Expression


Co-expression Network