Gene
RNA
| Item | Value |
|---|---|
| gene id | G167013 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 60610965 ~ 60611199 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU190273 | True | 235 | lncRNA | 0.40 | 1 | 60610965 | 60611199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492890 | LOC106561126 | coding | downstream | 51219 | 60537619 ~ 60559746 (-) |
| ppp1r3ab | LOC106561019 | coding | downstream | 140407 | 60448878 ~ 60470558 (-) |
| LOC110492857 | LOC106561020 | coding | downstream | 173405 | 60419131 ~ 60437560 (-) |
| ptprz1a | ptprz1 | coding | downstream | 238323 | 60293012 ~ 60372642 (-) |
| LOC110492814 | asb15 | coding | downstream | 647816 | 59951992 ~ 59963149 (-) |
| LOC110492911 | LOC106561018 | coding | upstream | 13943 | 60625142 ~ 60627473 (-) |
| LOC110493006 | LOC106561012 | coding | upstream | 223958 | 60835157 ~ 60850563 (-) |
| LOC110493125 | myod1c | coding | upstream | 270197 | 60881396 ~ 60883242 (-) |
| zgc:172145 | LOC106561011 | coding | upstream | 277594 | 60888793 ~ 60899520 (-) |
| LOC110493151 | LOC106561010 | coding | upstream | 433054 | 61044253 ~ 61059973 (-) |
| G167008 | NA | non-coding | downstream | 3767 | 60606976 ~ 60607198 (-) |
| G167006 | NA | non-coding | downstream | 4293 | 60606271 ~ 60606672 (-) |
| G166980 | NA | non-coding | downstream | 22918 | 60587823 ~ 60588047 (-) |
| G166952 | NA | non-coding | downstream | 41778 | 60568982 ~ 60569187 (-) |
| G166946 | NA | non-coding | downstream | 43776 | 60566844 ~ 60567189 (-) |
| G167014 | NA | non-coding | upstream | 86 | 60611285 ~ 60611515 (-) |
| G167709 | LOC106561016 | non-coding | upstream | 53756 | 60664955 ~ 60667126 (-) |
| G167719 | NA | non-coding | upstream | 59959 | 60671158 ~ 60671459 (-) |
| G167706 | LOC106561017 | non-coding | upstream | 84064 | 60695263 ~ 60740351 (-) |
| G167842 | NA | non-coding | upstream | 318453 | 60929652 ~ 60929867 (-) |
| G166877 | LOC106613263 | other | downstream | 95443 | 60515226 ~ 60515522 (-) |
| G166794 | LOC106561021 | other | downstream | 204157 | 60402348 ~ 60406808 (-) |
| G166541 | NA | other | downstream | 690635 | 59919878 ~ 59920330 (-) |
| LOC110492782 | LOC106561029 | other | downstream | 780950 | 59826624 ~ 59841614 (-) |
| G167723 | NA | other | upstream | 67524 | 60678723 ~ 60679041 (-) |
| G167866 | NA | other | upstream | 363563 | 60974762 ~ 60975021 (-) |
| G168021 | NA | other | upstream | 643313 | 61254512 ~ 61256015 (-) |
| LOC110493186 | mlkl | other | upstream | 679940 | 61290149 ~ 61303507 (-) |
