G167493


Basic Information

Item Value
gene id G167493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61424966 ~ 61425207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU190801
ACTGTCATGACTGTCCACGAGAATCCAAATAAGTCAGATCAGGTTTACTATGAATAACGTCTATCAGACCCCTCAAACCCGTAGAGGGGGAAGGAAAGAACTAGTGGGGTTTAACAACTCACATCCTGTTGTAAATCAAAGGAGAAGATCCAGGCCTGTGCTCTCAAGATTTACCAAAGGAATGTGCTTAGTCTCAACAGACTTTTTCCCACTGAAACTCTAATACATTCAAAAGCAAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190801 True 242 lncRNA 0.52 1 61424966 61425207

Neighbor

gene id symbol gene type direction distance location
LOC118941126 NA coding upstream 112419 61311328 ~ 61312547 (+)
LOC118941124 NA coding upstream 165941 61257716 ~ 61259025 (+)
LOC110493175 LOC106561005 coding upstream 233117 61130439 ~ 61193594 (+)
LOC110493150 cacna2d4 coding upstream 333546 60999577 ~ 61091420 (+)
LOC118937285 NA coding upstream 549529 60873225 ~ 60875437 (+)
LOC110493325 LOC106561124 coding downstream 51904 61477111 ~ 61479816 (+)
LOC110493335 LOC106560997 coding downstream 73889 61499096 ~ 61509316 (+)
LOC110501762 LOC106560954 coding downstream 95278 61520483 ~ 61525531 (+)
LOC110510683 LOC106560954 coding downstream 100076 61525283 ~ 61535728 (+)
LOC118941130 NA coding downstream 113658 61538865 ~ 61567852 (+)
G167487 NA non-coding upstream 5946 61418800 ~ 61419020 (+)
G167455 LOC106561000 non-coding upstream 9819 61382078 ~ 61415147 (+)
G167185 NA non-coding upstream 132554 61290149 ~ 61292412 (+)
G167402 NA non-coding upstream 163194 61261483 ~ 61261772 (+)
G167397 NA non-coding upstream 173884 61250863 ~ 61251082 (+)
G167494 NA non-coding downstream 1970 61427177 ~ 61427482 (+)
G167509 NA non-coding downstream 72282 61497489 ~ 61498830 (+)
G167535 NA non-coding downstream 87014 61512221 ~ 61512476 (+)
G167539 NA non-coding downstream 93958 61519165 ~ 61519535 (+)
G167325 LOC106561003 other upstream 192421 61232196 ~ 61232545 (+)
G167288 NA other upstream 350375 61062593 ~ 61074591 (+)
LOC110493059 LOC100194658 other upstream 558511 60851417 ~ 60866455 (+)
G166878 NA other upstream 909086 60515632 ~ 60515880 (+)
G166131 lmod2 other upstream 1471801 59945708 ~ 59953165 (+)
G167609 LOC106560954 other downstream 301752 61726959 ~ 61727454 (+)
LOC118936783 LOC106560954 other downstream 454563 61870393 ~ 61880657 (+)
G169130 NA other downstream 1360151 62785358 ~ 62785643 (+)
G170131 NA other downstream 2395254 63820461 ~ 63830320 (+)

Expression


Co-expression Network