G168078



Basic Information


Item Value
gene id G168078
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61490434 ~ 61491671 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU191442
AAAAAGGGCGTGATCAGTTTTATCATTAACATCTGAGTATGATTCGATCATTCATCTGCAAAAGATAAATCCAATTAGTGTTTTAGATAGAACCAATAGCCGGTAGTGTCCGGTGAGGTTAAAATCCAATAGCTGGTAGTGTCCGGTGAGGTGTCTACAATAGATTAATGTATGATTAAGATATGTTGGACTGAAAAGTCCGCTTTGTGTTGTGGCCAGAATGAATGTGATAAATGTACTAATGTGTGATGTCATAGAATAAGATGTTCTAATTGAACAATTGTGTTTAAAACTATGTCCATGTAATAATATTTGTGTGTTGACTATAGACTAAATGTAAACGGCGTTTCACAAGTCCCtgatattattaccattatttaAAATTATTGTGAGCAAAGTATTTcctaaattcaaaaaaaaaaaaaaaatctattatcCAAATTGTTTAAACATAGTTTATGTTGATAATCATTTCCTGAATTGGTGGCTCGTGTTTAATCATTAAAACATTATTGTTTAAAATTCTGGATATATGACGGAGAGGCTCTGAGTTAAGACAGAGTACGAGTAATAGTGTCTCCTAAGAATACATCACTGGCACGAGCCAGTGACGGGCTAAGTATATCCaaagagtgtacaaaatatttctaaaaaaaaacACGTCAAATCAGCACCtaagacaggtggaggagaggtttgGCATTACACACAAGTTTGGCTCTGTGTATAGGCCGCAATCGCAGGGCCTTGTGGAACGCTGTAATCAAAATCtgaaagctaagatagctaaagtgTGTGCAGGGACACATCTTTCACCCCATGAAATAATGACAGGTAGAGTAATGCCAGGGCCACCAAgagagggaggtcatatgcccccTCTTGATGTGCACcaaatagggatgtctgactatGTGAAGAAATTGACGGAATTGTCTGCAGCTCTCTCCAAACAGATACACCGTGTCGCAGAGAGGGAGCTGACTGACGTCCCGGAACAACCAAGGGTAAAAGTTGGGGACTGGGTAAGGATCaaggtccacaagagaaagtgggctgatcccaggtggactggaccgtacgaagtgaaggaggttacttcacactcagtccaggtcaaaggtaaattaGGCGCACCTTGGCACCACCTGACACATTGTACACCAGCC

Function


NR:

description
PREDICTED: uncharacterized protein LOC106589496

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU191442 True 1169 TUCP 0.40 2 61490434 61491671

Neighbor


gene id symbol gene type direction distance location
LOC110493282 LOC106560998 coding downstream 26132 61436215 ~ 61464302 (-)
LOC118936773 NA coding downstream 61967 61417500 ~ 61428467 (-)
LOC110493250 nfyb coding downstream 75132 61370307 ~ 61415302 (-)
LOC110493274 NA coding downstream 108228 61380548 ~ 61382206 (-)
LOC118944178 NA coding downstream 119233 61371088 ~ 61371201 (-)
mon2 LOC106560994 coding upstream 675747 62167418 ~ 62217632 (-)
slc6a13 LOC106560993 coding upstream 732262 62223933 ~ 62258267 (-)
LOC110493394 akr1d1 coding upstream 777133 62268804 ~ 62272122 (-)
wnt7bb LOC106560992 coding upstream 979573 62471244 ~ 62508410 (-)
LOC110493460 LOC106560989 coding upstream 1257333 62749004 ~ 62878134 (-)
G168108 NA non-coding downstream 59411 61430713 ~ 61431023 (-)
G168099 NA non-coding downstream 73543 61416663 ~ 61416891 (-)
LOC118941125 NA non-coding downstream 128914 61306910 ~ 61361520 (-)
LOC110493186 mlkl non-coding downstream 195514 61290149 ~ 61303507 (-)
G168033 NA non-coding downstream 221416 61268566 ~ 61269018 (-)
G168129 NA non-coding upstream 3561 61495232 ~ 61495725 (-)
G168132 NA non-coding upstream 6736 61498407 ~ 61498825 (-)
G168133 NA non-coding upstream 16463 61508134 ~ 61509299 (-)
G168139 NA non-coding upstream 21230 61512901 ~ 61513251 (-)
G168143 NA non-coding upstream 27196 61518867 ~ 61519213 (-)
G168021 NA other downstream 234419 61254512 ~ 61256015 (-)
G167866 NA other downstream 515413 60974762 ~ 60975021 (-)
G167706 LOC106561017 other downstream 750083 60695263 ~ 60740351 (-)
G167723 NA other downstream 811393 60678723 ~ 60679041 (-)
G168141 NA other upstream 23566 61515237 ~ 61515656 (-)
LOC110493507 LOC106560984 other upstream 1655103 63146769 ~ 63224837 (-)
LOC110501772 LOC106560973 other upstream 2467852 63958607 ~ 63963969 (-)
tmem117 LOC106573612 other upstream 2674292 64102056 ~ 64170220 (-)
G172141 NA other upstream 3593901 65085572 ~ 65086188 (-)

Expression



Co-expression Network