G168133



Basic Information


Item Value
gene id G168133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 61508134 ~ 61509299 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU191499
atttattttattttgaattcaatacTTAAAGGCGTGAAATTGACCCCATATGTTTTCCCCAAACAATATACAATATTGTTGCATTCCCTCCCCACCACCATATCATAAACATCAAGGGCGTTTTTACTAAGACATATGCAATGTACACAACTGAAAACTGCTCCCCAAAAAAACAGGACACTGTCCTTGCCACCAAACTATACTTGATTTTCAGCacaaattgaaaatatatttatgcAAATATGATATGATAAATCAATTGGCACATATTTTTATTATTGGCATGTCATTATGTATTTTCCCTTTGTCCAGAGTTGACAAATACAAGACCAAAATAGTAGGCTGGGAAATGGGTTGTTTGGTCATTTCACCTACTTGGACCATGTGAAAACGCACTTGTATACACGGTTTAAAGATCATATCTTTAGTCAGACGACAAGAAAAATCTGACAGGATATGTAGAGGGTATACCATGAATAAACTAAAAGTACTGTCAGTCTCTATAGTTGTAGCATCCAGCAGTCTTCTGCCCTGCCTGGATACTTTCCAGTAACAGCAGAGGGCGATACAGCAACATTAAAAACTGAATATGGACCAGAGTTATTAGGAAGGTGTCATTGATCATAGTTTATGAAAATGGGCAAGGACATGGCGGAGGTcaaaacacaactacatatagagttgatctccactataaacaaAGGTTTAGAAACTCCAGCATTCCCAAACATTTCACAGAAAACAGCATTTATGCTTTAAAACAGGTCAAGCAGAGAGGGAGGCTTGGTAGGGGGAGTCTCCAAGGTAACATGTAAAAACAATAGTGGGTATTACAGCgaataaaaaagaaaaaaaagaacattCCAACCCATCCAATGTATTCATCCAAGATATGAGGGGCTTTTCAAACCGTTTCAAAATGACAGTGAAAGCGTAAAAAGTGCACAGTCCAGATTCTTCTCAGTAAGGGTTTAGGGGAGGATGGCGTGTGCACACACACGCCTATAtgtggaggcagggagaggagtgTGCGTGTTACGTGCTCTTCatcatcttcctcttcttcaaCAGTCTCTCTCGCCAGTCATCAGGTAAAGCCTCAAAGTTTGCGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU191499 True 1112 lncRNA 0.43 2 61508134 61509299

Neighbor


gene id symbol gene type direction distance location
LOC110493282 LOC106560998 coding downstream 43832 61436215 ~ 61464302 (-)
LOC118936773 NA coding downstream 79667 61417500 ~ 61428467 (-)
LOC110493250 nfyb coding downstream 92832 61370307 ~ 61415302 (-)
mon2 LOC106560994 coding upstream 658119 62167418 ~ 62217632 (-)
slc6a13 LOC106560993 coding upstream 714634 62223933 ~ 62258267 (-)
LOC110493394 akr1d1 coding upstream 759505 62268804 ~ 62272122 (-)
wnt7bb LOC106560992 coding upstream 961945 62471244 ~ 62508410 (-)
LOC110493460 LOC106560989 coding upstream 1239705 62749004 ~ 62878134 (-)
G168132 NA non-coding downstream 9309 61498407 ~ 61498825 (-)
G168129 NA non-coding downstream 12409 61495232 ~ 61495725 (-)
G168108 NA non-coding downstream 77111 61430713 ~ 61431023 (-)
G168099 NA non-coding downstream 91243 61416663 ~ 61416891 (-)
LOC118941125 NA non-coding downstream 146614 61306910 ~ 61361520 (-)
G168139 NA non-coding upstream 3602 61512901 ~ 61513251 (-)
G168143 NA non-coding upstream 9568 61518867 ~ 61519213 (-)
G168144 NA non-coding upstream 10433 61519732 ~ 61520155 (-)
G168232 NA non-coding upstream 300358 61809657 ~ 61812532 (-)
G168249 NA non-coding upstream 376958 61886257 ~ 61921922 (-)
G168078 NA other downstream 16463 61490434 ~ 61491671 (-)
LOC110493186 mlkl other downstream 208042 61290149 ~ 61303507 (-)
G168021 NA other downstream 252119 61254512 ~ 61256015 (-)
G167866 NA other downstream 533113 60974762 ~ 60975021 (-)
G167706 LOC106561017 other downstream 767783 60695263 ~ 60740351 (-)
G168141 NA other upstream 5938 61515237 ~ 61515656 (-)
LOC110493507 LOC106560984 other upstream 1637475 63146769 ~ 63224837 (-)
LOC110501772 LOC106560973 other upstream 2450224 63958607 ~ 63963969 (-)
tmem117 LOC106573612 other upstream 2656664 64102056 ~ 64170220 (-)
G172141 NA other upstream 3576273 65085572 ~ 65086188 (-)

Expression



Co-expression Network