G168409


Basic Information

Item Value
gene id G168409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 62117175 ~ 62117597 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU191782
tacttcgtacatgacacaagtcatttttccaacaattgtttacagacagattatttcacttataattcactgtatcacaattccagtgggtcagaagtttacatacactaagttgactgtgccttttaaacagcttggaaaattccagaaaatgatgtcattgctttgacataatttgagtcaattggcgatgtacctgtggatgtatttcaaggcctaccttcagtctcagtgcctctttgcttgacatcatgggaaaatcaaaagaaatcagcctcagacctccacaagtctggtagatctccacaagtctggttcatcattgggagcaatttacaaatgcctgaaggtaccacgttcatctgtacaaacaatagtacgcaagtataaacaccatggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191782 True 401 lncRNA 0.43 2 62117175 62117597

Neighbor

gene id symbol gene type direction distance location
avpr1aa LOC106560996 coding upstream 54431 62057929 ~ 62062744 (+)
LOC110491137 LOC106560954 coding upstream 201056 61910943 ~ 61916119 (+)
LOC118937286 LOC106560954 coding upstream 211990 61902987 ~ 61905185 (+)
LOC118936783 LOC106560954 coding upstream 236518 61870393 ~ 61880657 (+)
LOC118941134 LOC106560954 coding upstream 246817 61862246 ~ 61870358 (+)
fbln1 fbln1 coding downstream 165607 62283204 ~ 62369308 (+)
LOC118941151 NA coding downstream 402935 62520532 ~ 62530986 (+)
LOC110493430 NA coding downstream 444586 62562183 ~ 62618837 (+)
pparab ppara coding downstream 522911 62640508 ~ 62704574 (+)
LOC110493442 yars2 coding downstream 605848 62723445 ~ 62737914 (+)
G168335 NA non-coding upstream 78352 61991511 ~ 62038823 (+)
G168293 NA non-coding upstream 170731 61946204 ~ 61946444 (+)
G168291 NA non-coding upstream 171757 61945109 ~ 61945418 (+)
G168280 NA non-coding upstream 179400 61937486 ~ 61937775 (+)
G168279 NA non-coding upstream 179891 61937048 ~ 61937284 (+)
G168460 mon2 non-coding downstream 76558 62194155 ~ 62195468 (+)
G168539 NA non-coding downstream 198154 62315751 ~ 62315972 (+)
G168985 NA non-coding downstream 352332 62469929 ~ 62471380 (+)
G168986 LOC106560992 non-coding downstream 356543 62474140 ~ 62476409 (+)
G168991 LOC107388424 non-coding downstream 364530 62482127 ~ 62482380 (+)
G167609 LOC106560954 other upstream 389721 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 584848 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 884630 61232196 ~ 61232545 (+)
G167288 NA other upstream 1042584 61062593 ~ 61074591 (+)
G169130 NA other downstream 667761 62785358 ~ 62785643 (+)
G170131 NA other downstream 1702864 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 1755651 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 3413549 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 3475920 65593468 ~ 65648660 (+)

Expression


Co-expression Network