Gene
RNA
| Item | Value |
|---|---|
| gene id | G168992 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 62482740 ~ 62482954 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192387 | True | 215 | lncRNA | 0.39 | 1 | 62482740 | 62482954 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fbln1 | fbln1 | coding | upstream | 113432 | 62283204 ~ 62369308 (+) |
| ppm1h | LOC106560995 | coding | upstream | 328244 | 62092419 ~ 62154496 (+) |
| avpr1aa | LOC106560996 | coding | upstream | 419996 | 62057929 ~ 62062744 (+) |
| LOC110491137 | LOC106560954 | coding | upstream | 566621 | 61910943 ~ 61916119 (+) |
| LOC118937286 | LOC106560954 | coding | upstream | 577555 | 61902987 ~ 61905185 (+) |
| LOC118941151 | NA | coding | downstream | 37578 | 62520532 ~ 62530986 (+) |
| LOC110493430 | NA | coding | downstream | 79229 | 62562183 ~ 62618837 (+) |
| pparab | ppara | coding | downstream | 157554 | 62640508 ~ 62704574 (+) |
| LOC110493442 | yars2 | coding | downstream | 240491 | 62723445 ~ 62737914 (+) |
| LOC118941152 | NA | coding | downstream | 443792 | 62926746 ~ 62927472 (+) |
| G168991 | LOC107388424 | non-coding | upstream | 360 | 62482127 ~ 62482380 (+) |
| G168986 | LOC106560992 | non-coding | upstream | 6331 | 62474140 ~ 62476409 (+) |
| G168985 | NA | non-coding | upstream | 11360 | 62469929 ~ 62471380 (+) |
| G168539 | NA | non-coding | upstream | 166768 | 62315751 ~ 62315972 (+) |
| G168460 | mon2 | non-coding | upstream | 287272 | 62194155 ~ 62195468 (+) |
| G169015 | NA | non-coding | downstream | 128410 | 62611364 ~ 62612530 (+) |
| G169013 | NA | non-coding | downstream | 138278 | 62621232 ~ 62621911 (+) |
| G169016 | NA | non-coding | downstream | 142122 | 62625076 ~ 62625794 (+) |
| LOC118936783 | LOC106560954 | other | upstream | 602316 | 61870393 ~ 61880657 (+) |
| G167609 | LOC106560954 | other | upstream | 755286 | 61726959 ~ 61727454 (+) |
| LOC110510683 | LOC106560954 | other | upstream | 950413 | 61525283 ~ 61535728 (+) |
| G167325 | LOC106561003 | other | upstream | 1250195 | 61232196 ~ 61232545 (+) |
| G167288 | NA | other | upstream | 1408149 | 61062593 ~ 61074591 (+) |
| G169130 | NA | other | downstream | 302404 | 62785358 ~ 62785643 (+) |
| G170131 | NA | other | downstream | 1337507 | 63820461 ~ 63830320 (+) |
| G170150 | LOC106560975 | other | downstream | 1390294 | 63873248 ~ 63878233 (+) |
| map1lc3b | map1lc3b | other | downstream | 3048192 | 65531126 ~ 65536787 (+) |
| jph3 | jph3 | other | downstream | 3110563 | 65593468 ~ 65648660 (+) |
