Gene
RNA
| Item | Value |
|---|---|
| gene id | G169013 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 62621232 ~ 62621911 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192411 | True | 680 | lncRNA | 0.38 | 1 | 62621232 | 62621911 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493430 | NA | coding | upstream | 2395 | 62562183 ~ 62618837 (+) |
| LOC118941151 | NA | coding | upstream | 90246 | 62520532 ~ 62530986 (+) |
| fbln1 | fbln1 | coding | upstream | 251924 | 62283204 ~ 62369308 (+) |
| ppm1h | LOC106560995 | coding | upstream | 466736 | 62092419 ~ 62154496 (+) |
| avpr1aa | LOC106560996 | coding | upstream | 558488 | 62057929 ~ 62062744 (+) |
| pparab | ppara | coding | downstream | 18597 | 62640508 ~ 62704574 (+) |
| LOC110493442 | yars2 | coding | downstream | 101534 | 62723445 ~ 62737914 (+) |
| LOC118941152 | NA | coding | downstream | 304835 | 62926746 ~ 62927472 (+) |
| mrps35 | LOC106560988 | coding | downstream | 385412 | 63007323 ~ 63022862 (+) |
| LOC110493518 | pus7 | coding | downstream | 604259 | 63226170 ~ 63238260 (+) |
| G169015 | NA | non-coding | upstream | 8702 | 62611364 ~ 62612530 (+) |
| G168992 | NA | non-coding | upstream | 138278 | 62482740 ~ 62482954 (+) |
| G168991 | LOC107388424 | non-coding | upstream | 138852 | 62482127 ~ 62482380 (+) |
| G169016 | NA | non-coding | downstream | 3165 | 62625076 ~ 62625794 (+) |
| G169069 | NA | non-coding | downstream | 9958 | 62631869 ~ 62632110 (+) |
| G169082 | NA | non-coding | downstream | 89947 | 62711858 ~ 62712057 (+) |
| G169108 | NA | non-coding | downstream | 138445 | 62760356 ~ 62760657 (+) |
| LOC118936783 | LOC106560954 | other | upstream | 740808 | 61870393 ~ 61880657 (+) |
| G167609 | LOC106560954 | other | upstream | 893778 | 61726959 ~ 61727454 (+) |
| LOC110510683 | LOC106560954 | other | upstream | 1088905 | 61525283 ~ 61535728 (+) |
| G167325 | LOC106561003 | other | upstream | 1388687 | 61232196 ~ 61232545 (+) |
| G167288 | NA | other | upstream | 1546641 | 61062593 ~ 61074591 (+) |
| G169130 | NA | other | downstream | 163447 | 62785358 ~ 62785643 (+) |
| G170131 | NA | other | downstream | 1198550 | 63820461 ~ 63830320 (+) |
| G170150 | LOC106560975 | other | downstream | 1251337 | 63873248 ~ 63878233 (+) |
| map1lc3b | map1lc3b | other | downstream | 2909235 | 65531126 ~ 65536787 (+) |
| jph3 | jph3 | other | downstream | 2971606 | 65593468 ~ 65648660 (+) |
