G169016


Basic Information

Item Value
gene id G169016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 62625076 ~ 62625794 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU192414
aaacaaatgatagtcccactaagcgcaaaccatggtagccatgctggttaagtgtgtcttcaattgtaaatgaatcactaacagtgtcaccagcaaagcacccccacacctcctcaatgcttcatggtgggaacaacacatgcagagatcatccgttcacctactctgcgtctcacaaagacacggcggttggaaccaaaaatcgaatttggactcatcagaccaaagggcagatttccaccggtctaatttcCATGGAAACCACGACTTGCCtgggccaagcaagtctcttcttattataggtgtcctttagtagtggtttctttgcagaaatttgaccatgaaggcctgattcaaccagtctcctctgaacagttgatgttgagatgtgtctgttacttgaagtctGTGAAGTATTTACGTGGGCTGCAAACTcgaataaacttatcctctgcagcagagataactctagGACTTAGTTTCCTGTGGCCgtactcatgagagccagttttatcatagcacttgatggtttttgagactgcacttgaagaaacttcaaaAGAAAGTTTCCGAaagttttccggattgactgaccttcatgtaatAGTGTACTGTCAttgctctttgcttatttgagctgttcttgccataatatggacttggtcttttaccaaatagggctatcttctgtataccacccctaccttgtcacaacacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192414 True 719 lncRNA 0.45 1 62625076 62625794

Neighbor

gene id symbol gene type direction distance location
LOC110493430 NA coding upstream 6239 62562183 ~ 62618837 (+)
LOC118941151 NA coding upstream 94090 62520532 ~ 62530986 (+)
fbln1 fbln1 coding upstream 255768 62283204 ~ 62369308 (+)
ppm1h LOC106560995 coding upstream 470580 62092419 ~ 62154496 (+)
avpr1aa LOC106560996 coding upstream 562332 62057929 ~ 62062744 (+)
pparab ppara coding downstream 14714 62640508 ~ 62704574 (+)
LOC110493442 yars2 coding downstream 97651 62723445 ~ 62737914 (+)
LOC118941152 NA coding downstream 300952 62926746 ~ 62927472 (+)
mrps35 LOC106560988 coding downstream 381529 63007323 ~ 63022862 (+)
LOC110493518 pus7 coding downstream 600376 63226170 ~ 63238260 (+)
G169013 NA non-coding upstream 3165 62621232 ~ 62621911 (+)
G169015 NA non-coding upstream 12546 62611364 ~ 62612530 (+)
G168992 NA non-coding upstream 142122 62482740 ~ 62482954 (+)
G169069 NA non-coding downstream 6075 62631869 ~ 62632110 (+)
G169082 NA non-coding downstream 86064 62711858 ~ 62712057 (+)
G169108 NA non-coding downstream 134562 62760356 ~ 62760657 (+)
G169114 NA non-coding downstream 138850 62764644 ~ 62764848 (+)
LOC118936783 LOC106560954 other upstream 744652 61870393 ~ 61880657 (+)
G167609 LOC106560954 other upstream 897622 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 1092749 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 1392531 61232196 ~ 61232545 (+)
G167288 NA other upstream 1550485 61062593 ~ 61074591 (+)
G169130 NA other downstream 159564 62785358 ~ 62785643 (+)
G170131 NA other downstream 1194667 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 1247454 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 2905352 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 2967723 65593468 ~ 65648660 (+)

Expression


Co-expression Network